WormBase Tree Display for Gene: WBGene00016989
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| WBGene00016989 | SMap | S_parent | Sequence | CD4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mrpl-48 | Person_evidence | WBPerson7169 | |||||
| WBPerson117 | |||||||||
| Sequence_name | CD4.3 | ||||||||
| Molecular_name | CD4.3 | ||||||||
| CD4.3.1 | |||||||||
| CE16951 | |||||||||
| CD4.3.2 | |||||||||
| Other_name | CELE_CD4.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mrpl-48 | ||||||||
| DB_info | Database | AceView | gene | 5G73 | |||||
| WormQTL | gene | WBGene00016989 | |||||||
| WormFlux | gene | WBGene00016989 | |||||||
| NDB | locus_tag | CELE_CD4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016989|UniProtKB=O44159 | |||||||
| family | PTHR13473 | ||||||||
| NCBI | gene | 259341 | |||||||
| RefSeq | protein | NM_072074.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315130 | |||||||
| TrEMBL | UniProtAcc | O44159 | |||||||
| UniProt_GCRP | UniProtAcc | O44159 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Jun 2018 14:30:09 | WBPerson1983 | Name_change | CGC_name | mrpl-48 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrpl | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032101 | ||||||||
| 00032102 | |||||||||
| 00032103 | |||||||||
| 00122493 | |||||||||
| Contained_in_operon | CEOP5076 | ||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00012556 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Predicted to be located in mitochondrial ribosome. Predicted to be part of ribonucleoprotein complex. Is an ortholog of human MRPL48 (mitochondrial ribosomal protein L48). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008565 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043303 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030293 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071531 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011292 | ||||||||
| Expr1037295 | |||||||||
| Expr1147283 | |||||||||
| Expr2001992 | |||||||||
| Expr2020216 | |||||||||
| Drives_construct | WBCnstr00027653 | ||||||||
| Construct_product | WBCnstr00027653 | ||||||||
| Microarray_results | SMD_CD4.3 | ||||||||
| 177332_at | |||||||||
| A_12_P117520 | |||||||||
| Aff_CD4.3 | |||||||||
| GPL13394_WBGene00016989 | |||||||||
| GPL13914_CD4.3 | |||||||||
| GPL14144_CD4.3_224-283_0.909_6_C | |||||||||
| GPL14144_CD4.3_440-499_0.944_3_B | |||||||||
| GPL14144_CD4.3_506-565_0.966_1_A | |||||||||
| GPL19516_CGZ0010931 | |||||||||
| GPL19516_CGZ0010932 | |||||||||
| GPL21109_CD4.3.1 | |||||||||
| GPL3518_CE16951 | |||||||||
| GPL8304_CE_WBGene00016989_A | |||||||||
| GPL8304_CE_WBGene00016989_C | |||||||||
| GPL8673_CD4_3P00001 | |||||||||
| GPL8673_CD4_3P00216 | |||||||||
| GPL8673_CD4_3P00324 | |||||||||
| GPL9450_CD4.3 | |||||||||
| cea2.c.34938 | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Positive | Positive_clone | CD4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -1.36952 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
