WormBase Tree Display for Gene: WBGene00016649
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WBGene00016649 | SMap | S_parent | Sequence | C44C8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | fbxc-1 | Person_evidence | WBPerson655 | |||
Sequence_name | C44C8.4 | ||||||
Molecular_name | C44C8.4 | ||||||
C44C8.4.1 | |||||||
CE40752 | |||||||
Other_name | CELE_C44C8.4 | Accession_evidence | NDB | BX284604 | |||
Public_name | fbxc-1 | ||||||
DB_info | Database | AceView | gene | 4B645 | |||
WormFlux | gene | WBGene00016649 | |||||
NDB | locus_tag | CELE_C44C8.4 | |||||
NCBI | gene | 183450 | |||||
RefSeq | protein | NM_067606.4 | |||||
TREEFAM | TREEFAM_ID | TF322489 | |||||
TrEMBL | UniProtAcc | G5EGJ4 | |||||
UniProt_GCRP | UniProtAcc | G5EGJ4 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxc | ||||||
Allele (18) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (21) | |||||||
Paralog (36) | |||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in intestine and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C44C8.4 | |||||
Corresponding_transcript | C44C8.4.1 | ||||||
Associated_feature | WBsf227891 | ||||||
Experimental_info | RNAi_result (9) | ||||||
Expr_pattern | Expr1146462 | ||||||
Drives_construct | WBCnstr00027912 | ||||||
Construct_product | WBCnstr00027912 | ||||||
Microarray_results | SMD_C44C8.1 | ||||||
SMD_C44C8.2 | |||||||
SMD_C44C8.3 | |||||||
SMD_C44C8.4 | |||||||
180035_s_at | |||||||
A_12_P132850 | |||||||
A_12_P137682 | |||||||
GPL14144_C44C8.1_871-930_0.950_1_A | |||||||
GPL19516_CGZ0008852 | |||||||
GPL19516_CGZ0025411 | |||||||
GPL21109_C44C8.4 | |||||||
GPL3518_CE17936 | |||||||
GPL8304_CE_WBGene00019073_A | |||||||
GPL8304_CE_WBGene00019073_B | |||||||
GPL8673_C44C8_1P00651 | |||||||
GPL8673_C44C8_2P01014 | |||||||
GPL8673_C44C8_3P01014 | |||||||
GPL8673_C44C8_4P01014 | |||||||
GPL8673_F58H7_8P00344 | |||||||
GPL8673_F58H7_8P00662 | |||||||
GPL9450_F58H7.8 | |||||||
cea2.d.30305 | |||||||
Expression_cluster (73) | |||||||
Interaction (125) | |||||||
Map_info | Map | IV | Position | -23.1715 | |||
Positive | Positive_clone | C44C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |