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WormBase Tree Display for Gene: WBGene00016088

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Name Class

WBGene00016088SMapS_parentSequenceC25B8
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (72)
StrainWBStrain00036366
WBStrain00051150
RNASeq_FPKM (74)
GO_annotation00022014
00022015
00022016
Ortholog (45)
Paralog (24)
Structured_descriptionAutomated_descriptionPredicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. Expressed in intestinal cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (4)
Experimental_infoRNAi_resultWBRNAi00041161Inferred_automaticallyRNAi_primary
WBRNAi00001487Inferred_automaticallyRNAi_primary
WBRNAi00011147Inferred_automaticallyRNAi_primary
WBRNAi00029183Inferred_automaticallyRNAi_primary
WBRNAi00041162Inferred_automaticallyRNAi_primary
WBRNAi00041164Inferred_automaticallyRNAi_primary
Expr_patternExpr12639
Expr1019626
Expr1036874
Expr1145193
Expr2010158
Expr2028401
Drives_constructWBCnstr00022346
WBCnstr00028333
Construct_productWBCnstr00022346
WBCnstr00028333
Microarray_resultsSMD_5C25B8.4
SMD_C25B8.4
191626_s_at
A_12_P102138
A_12_P118274
A_12_P151770
A_12_P151771
A_12_P151772
A_12_P151773
A_12_P151774
Aff_C25B8.4
GPL13394_WBGene00016088
GPL13914_C25B8.4
GPL14144_C25B8.4b_345-404_0.936_1_A
GPL19516_CGZ0005861
GPL19516_CGZ0005862
GPL19516_CGZ0005863
GPL21109_C25B8.4a
GPL21109_C25B8.4c
GPL3518_CE27087
GPL8304_CE_WBGene00016088_A
GPL8673_C25B8_4aP00014
GPL8673_C25B8_4aP00200
GPL8673_C25B8_4aP00496
GPL8673_C25B8_4bP00122
GPL8673_C25B8_4bP00308
GPL8673_C25B8_4bP00605
GPL8673_C25B8_4cP00014
GPL8673_C25B8_4cP00200
GPL8673_C25B8_4cP00284
GPL9450_C25B8.4
cea2.c.41829
Expression_cluster (351)
Interaction (169)
Map_infoMapXPosition-2.71813Error0.008827
PositivePositive_cloneC25B8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031686
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene