WormBase Tree Display for Gene: WBGene00016019
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WBGene00016019 | SMap | S_parent | Sequence | C23H3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ascc-1 | |||||
Sequence_name | C23H3.3 | ||||||
Molecular_name | C23H3.3b | ||||||
C23H3.3a | |||||||
CE41870 | |||||||
C23H3.3b.1 | |||||||
Other_name | CELE_C23H3.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | ascc-1 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ascc | ||||||
Allele (52) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00005547 | ||||||
00005548 | |||||||
00121708 | |||||||
00121709 | |||||||
00121710 | |||||||
Contained_in_operon | CEOP2004 | ||||||
Ortholog (32) | |||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in Barrett's esophagus. Is an ortholog of human ASCC1 (activating signal cointegrator 1 complex subunit 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:9206 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24268) | ||
EFO:MONDO:0000209 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24268) | ||||
Molecular_info | Corresponding_CDS | C23H3.3b | |||||
Corresponding_CDS_history | C23H3.3:wp185 | ||||||
C23H3.3a:wp247 | |||||||
Corresponding_transcript | C23H3.3a | ||||||
C23H3.3b.1 | |||||||
Other_sequence | CBC02716_1 | ||||||
CJC00705_1 | |||||||
Associated_feature | WBsf220713 | ||||||
WBsf220714 | |||||||
Experimental_info | RNAi_result | WBRNAi00029115 | Inferred_automatically | RNAi_primary | |||
WBRNAi00082514 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041021 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00077482 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011055 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082574 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081651 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017465 | ||||||
Expr1036843 | |||||||
Expr1145060 | |||||||
Expr2001015 | |||||||
Expr2019233 | |||||||
Microarray_results | SMD_C23H3.3 | ||||||
179923_at | |||||||
A_12_P104690 | |||||||
A_12_P141960 | |||||||
A_12_P141961 | |||||||
Aff_C23H3.3 | |||||||
GPL13394_WBGene00016019 | |||||||
GPL13914_C23H3.3 | |||||||
GPL14144_C23H3.3b_646-705_0.910_17_C | |||||||
GPL14144_C23H3.3b_784-843_0.922_10_B | |||||||
GPL14144_C23H3.3b_940-999_0.959_1_A | |||||||
GPL19516_CGZ0005550 | |||||||
GPL19516_CGZ0005551 | |||||||
GPL21109_C23H3.3a | |||||||
GPL21109_C23H3.3b | |||||||
GPL3518_CE08322 | |||||||
GPL8304_CE_WBGene00016019_A | |||||||
GPL8304_CE_WBGene00016019_B | |||||||
GPL8673_C23H3_3P00063 | |||||||
GPL8673_C23H3_3P00509 | |||||||
GPL8673_C23H3_3P00807 | |||||||
GPL9450_C23H3.3 | |||||||
cea2.i.09396 | |||||||
Expression_cluster (102) | |||||||
Interaction (22) | |||||||
Map_info | Positive | Positive_clone | C23H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | II | -17.4519 | |||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Method | Gene |