WormBase Tree Display for Gene: WBGene00015915
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WBGene00015915 | SMap | S_parent | Sequence | C17G10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C17G10.1 | |||||||
Molecular_name | C17G10.1 | ||||||||
C17G10.1.1 | |||||||||
CE01785 | |||||||||
C17G10.1.2 | |||||||||
Other_name | CELE_C17G10.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | C17G10.1 | ||||||||
DB_info | Database | AceView | gene | 2F887 | |||||
WormQTL | gene | WBGene00015915 | |||||||
WormFlux | gene | WBGene00015915 | |||||||
NDB | locus_tag | CELE_C17G10.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015915|UniProtKB=Q09973 | |||||||
family | PTHR12117 | ||||||||
NCBI | gene | 173947 | |||||||
RefSeq | protein | NM_062687.9 | |||||||
TREEFAM | TREEFAM_ID | TF105920 | |||||||
TrEMBL | UniProtAcc | Q09973 | |||||||
UniProt_GCRP | UniProtAcc | Q09973 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (29) | |||||||||
Strain | WBStrain00001914 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Contained_in_operon | CEOP2192 | ||||||||
Ortholog (38) | |||||||||
Structured_description | Automated_description | Predicted to enable peptidyl-proline dioxygenase activity. Predicted to be involved in regulation of translational termination. Predicted to be located in cytoplasm. Expressed in hypodermis. Is an ortholog of human OGFOD1 (2-oxoglutarate and iron dependent oxygenase domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C17G10.1 | |||||||
Corresponding_transcript | C17G10.1.1 | ||||||||
C17G10.1.2 | |||||||||
Other_sequence (26) | |||||||||
Associated_feature | WBsf221306 | ||||||||
WBsf221307 | |||||||||
Experimental_info | RNAi_result | WBRNAi00106375 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010928 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076145 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029020 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007800 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077897 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040835 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr2116 | ||||||||
Expr5288 | |||||||||
Expr1010358 | |||||||||
Expr1036804 | |||||||||
Expr1144879 | |||||||||
Expr2000926 | |||||||||
Expr2019147 | |||||||||
Drives_construct | WBCnstr00002703 | ||||||||
WBCnstr00028459 | |||||||||
Construct_product | WBCnstr00028459 | ||||||||
Microarray_results | SMD_C17G10.1 | ||||||||
185395_at | |||||||||
A_12_P117635 | |||||||||
Aff_C17G10.1 | |||||||||
GPL13394_WBGene00015915 | |||||||||
GPL13914_C17G10.1 | |||||||||
GPL14144_C17G10.1_1128-1187_0.947_6_C | |||||||||
GPL14144_C17G10.1_1193-1252_0.949_5_B | |||||||||
GPL14144_C17G10.1_1393-1452_0.964_1_A | |||||||||
GPL19516_CGZ0005143 | |||||||||
GPL19516_CGZ0005144 | |||||||||
GPL21109_C17G10.1.1 | |||||||||
GPL3518_CE01785 | |||||||||
GPL8304_CE_WBGene00015915_A | |||||||||
GPL8304_CE_WBGene00015915_B | |||||||||
GPL8304_CE_WBGene00015915_C | |||||||||
GPL8673_C17G10_1P00065 | |||||||||
GPL8673_C17G10_1P00579 | |||||||||
GPL8673_C17G10_1P01112 | |||||||||
GPL9450_C17G10.1 | |||||||||
cea2.p.30607 | |||||||||
Expression_cluster (124) | |||||||||
Interaction (50) | |||||||||
Map_info | Positive | Positive_clone | C17G10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -1.06167 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |