WormBase Tree Display for Gene: WBGene00014222
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WBGene00014222 | SMap | S_parent | Sequence | ZK1098 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | trpp-3 | Person_evidence | WBPerson3188 | |||
Sequence_name | ZK1098.5 | ||||||
Molecular_name | ZK1098.5 | ||||||
ZK1098.5.1 | |||||||
CE00368 | |||||||
Other_name | CELE_ZK1098.5 | Accession_evidence | NDB | BX284603 | |||
Public_name | trpp-3 | ||||||
DB_info | Database | AceView | gene | 3K615 | |||
WormQTL | gene | WBGene00014222 | |||||
WormFlux | gene | WBGene00014222 | |||||
NDB | locus_tag | CELE_ZK1098.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00014222|UniProtKB=P34605 | |||||
family | PTHR13048 | ||||||
NCBI | gene | 176344 | |||||
RefSeq | protein | NM_066699.7 | |||||
SwissProt | UniProtAcc | P34605 | |||||
TREEFAM | TREEFAM_ID | TF300091 | |||||
UniProt_GCRP | UniProtAcc | P34605 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | trpp | ||||||
Allele (21) | |||||||
Strain | WBStrain00051448 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Contained_in_operon | CEOP3596 | ||||||
Ortholog (37) | |||||||
Structured_description | Automated_description | Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle and protein secretion. Predicted to be located in cis-Golgi network membrane and cytosol. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC3 (trafficking protein particle complex subunit 3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK1098.5 | |||||
Corresponding_transcript | ZK1098.5.1 | ||||||
Other_sequence (34) | |||||||
Associated_feature | WBsf659416 | ||||||
WBsf225587 | |||||||
Experimental_info | RNAi_result | WBRNAi00059113 | Inferred_automatically | RNAi_primary | |||
WBRNAi00059112 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059111 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082858 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085570 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038148 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002785 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002662 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061602 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021807 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1024760 | ||||||
Expr1036375 | |||||||
Expr1162538 | |||||||
Expr2017510 | |||||||
Expr2035649 | |||||||
Drives_construct | WBCnstr00029214 | ||||||
Construct_product | WBCnstr00029214 | ||||||
Microarray_results | SMD_ZK1098.5 | ||||||
187448_at | |||||||
A_12_P112022 | |||||||
Aff_ZK1098.5 | |||||||
GPL13394_WBGene00014222 | |||||||
GPL13914_ZK1098.5 | |||||||
GPL14144_ZK1098.5_403-462_0.940_4_B | |||||||
GPL14144_ZK1098.5_483-542_0.960_1_A | |||||||
GPL14144_ZK1098.5_49-108_0.931_7_C | |||||||
GPL19516_CGZ0056238 | |||||||
GPL21109_ZK1098.5 | |||||||
GPL3518_CE00368 | |||||||
GPL8304_CE_WBGene00014222_A | |||||||
GPL8304_CE_WBGene00014222_B | |||||||
GPL8304_CE_WBGene00014222_C | |||||||
GPL8673_ZK1098_5P00190 | |||||||
GPL8673_ZK1098_5P00221 | |||||||
GPL8673_ZK1098_5P00279 | |||||||
GPL9450_ZK1098.5 | |||||||
cea2.c.25599 | |||||||
Expression_cluster (84) | |||||||
Interaction (111) | |||||||
Map_info | Map | III | Position | 0.577842 | |||
Positive | Positive_clone | ZK1098 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005423 | ||||||
WBPaper00005747 | |||||||
WBPaper00027766 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00060970 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |