WormBase Tree Display for Gene: WBGene00014222

WBGene00014222 SMap: S_parent: Sequence: ZK1098
  Identity: Version: 2
    Name: CGC_name: trpp-3 Person_evidence: WBPerson3188
      Sequence_name: ZK1098.5
      Molecular_name: ZK1098.5
        ZK1098.5.1
        CE00368
      Other_name: CELE_ZK1098.5 Accession_evidence: NDB BX284603
      Public_name: trpp-3
    DB_info: Database: AceView gene 3K615
        WormQTL gene WBGene00014222
        WormFlux gene WBGene00014222
        NDB locus_tag CELE_ZK1098.5
        Panther gene CAEEL|WormBase=WBGene00014222|UniProtKB=P34605
          family PTHR13048
        NCBI gene 176344
        RefSeq protein NM_066699.7
        SwissProt UniProtAcc P34605
        TREEFAM TREEFAM_ID TF300091
        UniProt_GCRP UniProtAcc P34605
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Aug 2013 16:41:57 WBPerson2970 Name_change: CGC_name: trpp-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: trpp
    Allele (21)
    Strain: WBStrain00051448
    RNASeq_FPKM (74)
    GO_annotation (18)
    Contained_in_operon: CEOP3596
    Ortholog (37)
    Structured_description: Automated_description: Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle and protein secretion. Predicted to be located in cis-Golgi network membrane and cytosol. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC3 (trafficking protein particle complex subunit 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1098.5
    Corresponding_transcript: ZK1098.5.1
    Other_sequence (34)
    Associated_feature: WBsf659416
      WBsf225587
  Experimental_info: RNAi_result: WBRNAi00059113 Inferred_automatically: RNAi_primary
      WBRNAi00059112 Inferred_automatically: RNAi_primary
      WBRNAi00059111 Inferred_automatically: RNAi_primary
      WBRNAi00082858 Inferred_automatically: RNAi_primary
      WBRNAi00085570 Inferred_automatically: RNAi_primary
      WBRNAi00038148 Inferred_automatically: RNAi_primary
      WBRNAi00002785 Inferred_automatically: RNAi_primary
      WBRNAi00002662 Inferred_automatically: RNAi_primary
      WBRNAi00061602 Inferred_automatically: RNAi_primary
      WBRNAi00021807 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024760
      Expr1036375
      Expr1162538
      Expr2017510
      Expr2035649
    Drives_construct: WBCnstr00029214
    Construct_product: WBCnstr00029214
    Microarray_results: SMD_ZK1098.5
      187448_at
      A_12_P112022
      Aff_ZK1098.5
      GPL13394_WBGene00014222
      GPL13914_ZK1098.5
      GPL14144_ZK1098.5_403-462_0.940_4_B
      GPL14144_ZK1098.5_483-542_0.960_1_A
      GPL14144_ZK1098.5_49-108_0.931_7_C
      GPL19516_CGZ0056238
      GPL21109_ZK1098.5
      GPL3518_CE00368
      GPL8304_CE_WBGene00014222_A
      GPL8304_CE_WBGene00014222_B
      GPL8304_CE_WBGene00014222_C
      GPL8673_ZK1098_5P00190
      GPL8673_ZK1098_5P00221
      GPL8673_ZK1098_5P00279
      GPL9450_ZK1098.5
      cea2.c.25599
    Expression_cluster (84)
    Interaction (111)
  Map_info (3)
  Reference: WBPaper00005423
    WBPaper00005747
    WBPaper00027766
    WBPaper00038491
    WBPaper00055090
    WBPaper00060970
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene