WormBase Tree Display for Gene: WBGene00013997
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WBGene00013997 | SMap | S_parent | Sequence | ZK550 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | eelo-2 | Person_evidence | WBPerson6609 | |||||
WBPerson1816 | |||||||||
Sequence_name | ZK550.3 | ||||||||
Molecular_name | ZK550.3 | ||||||||
ZK550.3.1 | |||||||||
CE37464 | |||||||||
Other_name | CELE_ZK550.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | eelo-2 | ||||||||
DB_info | Database | AceView | gene | 4S197 | |||||
WormQTL | gene | WBGene00013997 | |||||||
WormFlux | gene | WBGene00013997 | |||||||
NDB | locus_tag | CELE_ZK550.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013997|UniProtKB=O62512 | |||||||
family | PTHR11804 | ||||||||
NCBI | gene | 178501 | |||||||
RefSeq | protein | NM_070658.8 | |||||||
TREEFAM | TREEFAM_ID | TF351383 | |||||||
TrEMBL | UniProtAcc | O62512 | |||||||
UniProt_GCRP | UniProtAcc | O62512 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | eelo-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | eelo | ||||||||
Allele (104) | |||||||||
Strain | WBStrain00037792 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Contained_in_operon | CEOP4600 | ||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00013464 | Caenorhabditis elegans | From_analysis (2) | ||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of human THOP1 (thimet oligopeptidase 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK550.3 | |||||||
Corresponding_CDS_history | ZK550.3:wp99 | ||||||||
ZK550.3:wp131 | |||||||||
Corresponding_transcript | ZK550.3.1 | ||||||||
Other_sequence (47) | |||||||||
Associated_feature | WBsf646601 | ||||||||
WBsf660979 | |||||||||
WBsf229619 | |||||||||
Experimental_info | RNAi_result | WBRNAi00059513 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001542 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038337 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021244 | ||||||||
Expr1036255 | |||||||||
Expr1162930 | |||||||||
Expr2008873 | |||||||||
Expr2027106 | |||||||||
Microarray_results | SMD_ZK550.3 | ||||||||
179416_at | |||||||||
A_12_P100777 | |||||||||
Aff_ZK550.3 | |||||||||
GPL13394_WBGene00013997 | |||||||||
GPL13914_ZK550.3 | |||||||||
GPL14144_ZK550.3_1953-2012_0.917_4_C | |||||||||
GPL14144_ZK550.3_2045-2104_0.918_3_B | |||||||||
GPL14144_ZK550.3_2140-2199_0.960_1_A | |||||||||
GPL19516_CGZ0057034 | |||||||||
GPL21109_ZK550.3 | |||||||||
GPL3518_CE16734 | |||||||||
GPL8304_CE_WBGene00013997_A | |||||||||
GPL8304_CE_WBGene00013997_B | |||||||||
GPL8673_ZK550_3P00838 | |||||||||
GPL8673_ZK550_3P01364 | |||||||||
GPL8673_ZK550_3P01762 | |||||||||
GPL9450_ZK550.3 | |||||||||
cea2.p.105809 | |||||||||
Expression_cluster (109) | |||||||||
Interaction (90) | |||||||||
Map_info | Map | IV | Position | 16.2839 | |||||
Positive | Positive_clone | ZK550 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00034598 | ||||||||
WBPaper00036249 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |