WormBase Tree Display for Gene: WBGene00012939
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WBGene00012939 | Evidence | Inferred_automatically | Gene name parsed from strain object: CB7248 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y47D3B | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | subs-4 | Person_evidence | WBPerson261 | |||||
Sequence_name | Y47D3B.1 | ||||||||
Molecular_name | Y47D3B.1 | ||||||||
Y47D3B.1.1 | |||||||||
CE48290 | |||||||||
Other_name | CELE_Y47D3B.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | subs-4 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Apr 2018 09:44:00 | WBPerson1983 | Name_change | CGC_name | subs-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | subs | ||||||||
Allele (150) | |||||||||
Strain | WBStrain00004739 | ||||||||
WBStrain00004750 | |||||||||
WBStrain00004756 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (4) | |||||||||
Ortholog (27) | |||||||||
Paralog (36) | |||||||||
Structured_description | Automated_description | Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y47D3B.1 | |||||||
Corresponding_CDS_history | Y47D3B.1:wp85 | ||||||||
Y47D3B.1:wp236 | |||||||||
Corresponding_transcript | Y47D3B.1.1 | ||||||||
Other_sequence (27) | |||||||||
Associated_feature | WBsf994368 | ||||||||
WBsf994369 | |||||||||
WBsf1015989 | |||||||||
WBsf1015990 | |||||||||
WBsf225815 | |||||||||
WBsf225816 | |||||||||
Experimental_info | RNAi_result (24) | ||||||||
Expr_pattern | Expr1011204 | ||||||||
Expr1035735 | |||||||||
Expr1160221 | |||||||||
Expr2007610 | |||||||||
Expr2025847 | |||||||||
Drives_construct | WBCnstr00029784 | ||||||||
Construct_product | WBCnstr00029784 | ||||||||
Microarray_results | SMD_Y47D3B.1 | ||||||||
SMD_Y47D3B.2 | |||||||||
179861_at | |||||||||
A_12_P114987 | |||||||||
A_12_P177094 | |||||||||
A_12_P177095 | |||||||||
Aff_Y47D38.1 | |||||||||
GPL13394_WBGene00012939 | |||||||||
GPL13914_Y47D3B.1 | |||||||||
GPL14144_Y47D3B.1_1086-1145_0.873_19_C | |||||||||
GPL14144_Y47D3B.1_1217-1276_0.948_2_A | |||||||||
GPL14144_Y47D3B.1_986-1045_0.937_4_B | |||||||||
GPL19516_CGZ0046931 | |||||||||
GPL21109_Y47D3B.1 | |||||||||
GPL3518_CE31837 | |||||||||
GPL8304_CE_WBGene00012939_A | |||||||||
GPL8304_CE_WBGene00012939_B | |||||||||
GPL8673_Y47D3B_1P00337 | |||||||||
GPL8673_Y47D3B_1P00982 | |||||||||
GPL8673_Y47D3B_1P01245 | |||||||||
GPL9450_Y47D3B.1 | |||||||||
cea2.p.77666 | |||||||||
Expression_cluster (196) | |||||||||
Interaction | WBInteraction000393910 | ||||||||
WBInteraction000396828 | |||||||||
WBInteraction000536898 | |||||||||
WBInteraction000537003 | |||||||||
Map_info | Map | III | Position | 9.00434 | |||||
Positive | Positive_clone | Y47D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00051834 | ||||||||
WBPaper00065106 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |