WormBase Tree Display for Gene: WBGene00012830
expand all nodes | collapse all nodes | view schema
| WBGene00012830 | SMap | S_parent | Sequence | Y43F8C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mrps-28 | Person_evidence | WBPerson261 | |||||
| WBPerson555 | |||||||||
| Sequence_name | Y43F8C.8 | ||||||||
| Molecular_name | Y43F8C.8 | ||||||||
| Y43F8C.8.1 | |||||||||
| CE21906 | |||||||||
| Other_name | CELE_Y43F8C.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mrps-28 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2011 16:50:11 | WBPerson2970 | Name_change | CGC_name | mrps-28 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrps | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103711 | ||||||||
| 00103712 | |||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 47. Is an ortholog of human MRPS28 (mitochondrial ribosomal protein S28). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112114 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14513) | ||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1015088 | ||||||||
| Expr1035678 | |||||||||
| Expr1160010 | |||||||||
| Expr2013749 | |||||||||
| Expr2031984 | |||||||||
| Microarray_results | SMD_Y116F11A.ZZ3 | ||||||||
| SMD_Y43F8C.8 | |||||||||
| 182707_at | |||||||||
| 182708_s_at | |||||||||
| A_12_P104677 | |||||||||
| A_12_P163003 | |||||||||
| A_12_P163004 | |||||||||
| A_12_P163005 | |||||||||
| A_12_P163006 | |||||||||
| A_12_P163007 | |||||||||
| Aff_Y116F11.ZZ6 | |||||||||
| GPL13394_WBGene00012830 | |||||||||
| GPL13914_Y43F8C.8 | |||||||||
| GPL14144_Y43F8C.8_159-218_0.855_11_B | |||||||||
| GPL14144_Y43F8C.8_232-291_0.912_1_A | |||||||||
| GPL14144_Y43F8C.8_69-128_0.792_24_C | |||||||||
| GPL19516_CGZ0046398 | |||||||||
| GPL21109_Y43F8C.8 | |||||||||
| GPL3518_CE21906 | |||||||||
| GPL8304_CE_WBGene00012830_A | |||||||||
| GPL8304_CE_WBGene00012830_B | |||||||||
| GPL8304_CE_WBGene00012830_C | |||||||||
| GPL8673_Y43F8C_8P00115 | |||||||||
| GPL8673_Y43F8C_8P00129 | |||||||||
| GPL8673_Y43F8C_8P00278 | |||||||||
| GPL9450_Y43F8C.8 | |||||||||
| cea2.c.39712 | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (51) | |||||||||
| Map_info | Map | V | Position | 22.621 | Error | 0.023685 | |||
| Positive | Positive_clone | Y43F8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
