WormBase Tree Display for Gene: WBGene00012809
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WBGene00012809 | SMap | S_parent | Sequence | Y43F8A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y43F8A.2 | |||||||
Molecular_name | Y43F8A.2 | ||||||||
Y43F8A.2.1 | |||||||||
CE24284 | |||||||||
Other_name | CELE_Y43F8A.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | Y43F8A.2 | ||||||||
DB_info | Database | AceView | gene | 5T849 | |||||
WormQTL | gene | WBGene00012809 | |||||||
WormFlux | gene | WBGene00012809 | |||||||
NDB | locus_tag | CELE_Y43F8A.2 | |||||||
NCBI | gene | 180269 | |||||||
RefSeq | protein | NM_075369.4 | |||||||
TREEFAM | TREEFAM_ID | TF315919 | |||||||
TrEMBL | UniProtAcc | Q9U2G6 | |||||||
UniProt_GCRP | UniProtAcc | Q9U2G6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (389) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00017955 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in I5 neuron; cholinergic neurons; germ line; retrovesicular ganglion; and in male based on proteomic; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-eight chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y43F8A.2 | |||||||
Corresponding_transcript | Y43F8A.2.1 | ||||||||
Other_sequence | MJ00271 | ||||||||
MJC01291_1 | |||||||||
Associated_feature | WBsf1003231 | ||||||||
WBsf1003232 | |||||||||
WBsf1003233 | |||||||||
WBsf1003234 | |||||||||
WBsf1021731 | |||||||||
WBsf1021732 | |||||||||
WBsf1021733 | |||||||||
WBsf1021734 | |||||||||
Experimental_info | RNAi_result | WBRNAi00020546 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056499 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007477 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019957 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019955 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037048 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027757 | ||||||||
Expr1035668 | |||||||||
Expr1159965 | |||||||||
Expr2007494 | |||||||||
Expr2025730 | |||||||||
Microarray_results | SMD_Y116F11A. | ||||||||
SMD_Y116F11A.L | |||||||||
SMD_Y116F11A.M | |||||||||
SMD_Y43F8A.2 | |||||||||
181526_at | |||||||||
A_12_P115644 | |||||||||
Aff_Y116F11.P | |||||||||
GPL13394_WBGene00012809 | |||||||||
GPL13914_Y43F8A.2 | |||||||||
GPL14144_Y43F8A.2_1224-1283_0.938_5_B | |||||||||
GPL14144_Y43F8A.2_1335-1394_0.946_3_A | |||||||||
GPL14144_Y43F8A.2_950-1009_0.902_29_C | |||||||||
GPL19516_CGZ0046316 | |||||||||
GPL21109_Y43F8A.2 | |||||||||
GPL3518_CE24284 | |||||||||
GPL8304_CE_WBGene00012809_A | |||||||||
GPL8673_Y43F8A_2P00089 | |||||||||
GPL8673_Y43F8A_2P00336 | |||||||||
GPL8673_Y43F8A_2P01155 | |||||||||
GPL9450_Y43F8A.2 | |||||||||
cea2.p.128373 | |||||||||
Expression_cluster (231) | |||||||||
Interaction (55) | |||||||||
Map_info | Positive | Positive_clone | Y43F8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 21.5163 | |||||||
Method | Gene |