WormBase Tree Display for Gene: WBGene00012608

WBGene00012608 SMap: S_parent: Sequence: Y38F1A
  Identity: Version: 2
    Name: CGC_name: hphd-1 Paper_evidence: WBPaper00049812
          Person_evidence: WBPerson1997
            WBPerson21243
      Sequence_name: Y38F1A.6
      Molecular_name: Y38F1A.6
        Y38F1A.6.1
        CE24222
        Y38F1A.6.2
        Y38F1A.6.3
        Y38F1A.6.4
        Y38F1A.6.5
        Y38F1A.6.6
        Y38F1A.6.7
      Other_name: CELE_Y38F1A.6 Accession_evidence: NDB BX284602
      Public_name: hphd-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Sep 2016 10:15:14 WBPerson2970 Name_change: CGC_name: hphd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hphd
    Allele (56)
    Strain: WBStrain00003223
      WBStrain00033247
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (33)
    Structured_description: Automated_description: Predicted to enable alcohol dehydrogenase (NAD+) activity and hydroxyacid-oxoacid transhydrogenase activity. Predicted to be involved in glutamate catabolic process via 2-oxoglutarate. Predicted to be located in mitochondrion. Is an ortholog of human ADHFE1 (alcohol dehydrogenase iron containing 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38F1A.6
    Corresponding_transcript: Y38F1A.6.1
      Y38F1A.6.2
      Y38F1A.6.3
      Y38F1A.6.4
      Y38F1A.6.5
      Y38F1A.6.6
      Y38F1A.6.7
    Other_sequence (62)
    Associated_feature: WBsf650678
      WBsf666276
      WBsf666277
      WBsf666278
      WBsf990288
      WBsf224128
      WBsf224129
      WBsf224130
      WBsf224131
  Experimental_info: RNAi_result: WBRNAi00056037 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram870
      Expr6938
      Expr1019273
      Expr1035575
      Expr1159560
      Expr2012551
      Expr2030788
    Drives_construct: WBCnstr00003698
      WBCnstr00029885
    Construct_product: WBCnstr00029885
    Microarray_results: SMD_Y38F1A.6
      171923_x_at
      193016_s_at
      A_12_P105699
      A_12_P153045
      A_12_P153046
      Aff_Y38F1A.G
      GPL13394_WBGene00012608
      GPL13914_Y38F1A.6
      GPL14144_Y38F1A.6_1039-1098_0.948_4_A
      GPL14144_Y38F1A.6_1234-1293_0.944_6_B
      GPL14144_Y38F1A.6_916-975_0.928_13_C
      GPL19516_CGZ0044611
      GPL19516_CGZ0044612
      GPL19516_CGZ0044613
      GPL19516_CGZ0044614
      GPL19516_CGZ0044615
      GPL19516_CGZ0044616
      GPL19516_CGZ0044617
      GPL21109_Y38F1A.6.1
      GPL3518_CE24222
      GPL8304_CE_WBGene00012608_A
      GPL8673_Y38F1A_6P00027
      GPL8673_Y38F1A_6P00780
      GPL8673_Y38F1A_6P00969
      GPL9450_Y38F1A.6
      cea2.c.15186
    Expression_cluster (354)
    Interaction (44)
  Map_info (3)
  Reference: WBPaper00038491
    WBPaper00049812
    WBPaper00049828
    WBPaper00055090
    WBPaper00064263
    WBPaper00065140
    WBPaper00065272
    WBPaper00065288
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene