WormBase Tree Display for Gene: WBGene00012342

WBGene00012342 SMap: S_parent: Sequence: W08D2
  Identity: Version: 2
    Name: CGC_name: mtr-4 Person_evidence: WBPerson699
            WBPerson6229
      Sequence_name: W08D2.7
      Molecular_name: W08D2.7
        W08D2.7.1
        CE06562
      Other_name: CELE_W08D2.7 Accession_evidence: NDB BX284604
      Public_name: mtr-4
    DB_info: Database: AceView gene 4K593
        WormQTL gene WBGene00012342
        WormFlux gene WBGene00012342
        NDB locus_tag CELE_W08D2.7
        Panther gene CAEEL|WormBase=WBGene00012342|UniProtKB=Q23223
          family PTHR12131
        NCBI gene 177824
        RefSeq protein NM_069356.6
        SwissProt UniProtAcc Q23223
        TREEFAM TREEFAM_ID TF300597
        UniProt_GCRP UniProtAcc Q23223
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jun 2007 15:54:19 WBPerson2970 Name_change: CGC_name: mtr-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mtr
    Allele (58)
    Possibly_affected_by: WBVar02153240
      WBVar02153242
    Strain: WBStrain00002572
      WBStrain00032681
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (43)
    Paralog: WBGene00008502 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012896 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013189 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016194 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020964 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021905 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:332 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:18734)
  Molecular_info: Corresponding_CDS: W08D2.7
    Corresponding_transcript: W08D2.7.1
    Other_sequence (60)
    Associated_feature: WBsf646257
      WBsf228881
  Experimental_info: RNAi_result (30)
    Expr_pattern: Chronogram744
      Expr6854
      Expr12216
      Expr12227
      Expr15665
      Expr1011473
      Expr1035462
      Expr1158512
      Expr2013816
      Expr2032056
    Drives_construct: WBCnstr00003134
      WBCnstr00020415
      WBCnstr00029987
    Construct_product: WBCnstr00020470
      WBCnstr00029987
      WBCnstr00042026
      WBCnstr00042029
    Microarray_results: SMD_W08D2.7
      SMD_W08D2.7:2
      173343_s_at
      193145_at
      A_12_P115991
      Aff_W08D2.7
      GPL13394_WBGene00012342
      GPL13914_W08D2.7
      GPL14144_W08D2.7_401-460_0.806_105_A
      GPL14144_W08D2.7_583-642_0.793_122_B
      GPL14144_W08D2.7_759-818_0.782_140_C
      GPL19516_CGZ0038792
      GPL21109_W08D2.7
      GPL3518_CE06562
      GPL8304_CE_WBGene00012342_A
      GPL8304_CE_WBGene00012342_B
      GPL8304_CE_WBGene00012342_C
      GPL8673_W08D2_7P01609
      GPL8673_W08D2_7P02108
      GPL8673_W08D2_7P02840
      GPL9450_W08D2.7
      cea2.p.100182
    Expression_cluster (126)
    Interaction (193)
  Map_info: Map: IV Position: 4.42878 Error: 0.000727
    Positive: Positive_clone: W08D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (7)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene