WormBase Tree Display for Gene: WBGene00011610
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| WBGene00011610 | SMap | S_parent | Sequence | T08D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T08D2.5 | |||||||
| Molecular_name (4) | |||||||||
| Other_name | CELE_T08D2.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T08D2.5 | ||||||||
| DB_info | Database | AceView | gene | XA807 | |||||
| XA806 | |||||||||
| WormQTL | gene | WBGene00011610 | |||||||
| WormFlux | gene | WBGene00011610 | |||||||
| NDB | locus_tag | CELE_T08D2.5 | |||||||
| NCBI | gene | 188283 | |||||||
| RefSeq | protein | NM_001392711.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322499 | |||||||
| TrEMBL | UniProtAcc | A4F322 | |||||||
| UniProt_GCRP | UniProtAcc | A4F322 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX004 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00020467 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AFD; germline precursor cell; hypodermis; and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-16; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; D-glucose; and tert-Butylhydroperoxide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T08D2.5 | |||||||
| Corresponding_transcript | T08D2.5.1 | ||||||||
| T08D2.5.2 | |||||||||
| Other_sequence | CBC00501_1 | ||||||||
| CRC11654_1 | |||||||||
| CR05611 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1024163 | ||||||||
| Expr1156465 | |||||||||
| Expr2006001 | |||||||||
| Expr2024217 | |||||||||
| Microarray_results | SMD_T08D2.4 | ||||||||
| SMD_T08D2.5 | |||||||||
| A_12_P108184 | |||||||||
| A_12_P139275 | |||||||||
| A_12_P139276 | |||||||||
| A_12_P147386 | |||||||||
| Aff_T08D2.D | |||||||||
| GPL14144_T08D2.5_279-338_0.894_29_C | |||||||||
| GPL19516_CGZ0034215 | |||||||||
| GPL21109_T08D2.4 | |||||||||
| GPL3518_CE21171 | |||||||||
| GPL8304_CE_WBGene00011609_B | |||||||||
| GPL8304_CE_WBGene00011610_A | |||||||||
| GPL8304_CE_WBGene00011610_C | |||||||||
| GPL8673_T08D2_4P00186 | |||||||||
| GPL8673_T08D2_4P00194 | |||||||||
| GPL8673_T08D2_4P00201 | |||||||||
| GPL8673_T08D2_5P00745 | |||||||||
| Expression_cluster (70) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | T08D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -20.6129 | |||||||
| Method | Gene |
