WormBase Tree Display for Gene: WBGene00011560
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| WBGene00011560 | SMap | S_parent | Sequence | T07C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T07C4.3 | |||||||
| Molecular_name | T07C4.3a | ||||||||
| T07C4.3a.1 | |||||||||
| CE00602 | |||||||||
| T07C4.3b | |||||||||
| CE21158 | |||||||||
| T07C4.3c | |||||||||
| CE54547 | |||||||||
| T07C4.3b.1 | |||||||||
| T07C4.3c.1 | |||||||||
| Other_name | CELE_T07C4.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T07C4.3 | ||||||||
| DB_info | Database | AceView | gene | 3L443 | |||||
| WormQTL | gene | WBGene00011560 | |||||||
| WormFlux | gene | WBGene00011560 | |||||||
| NDB | locus_tag | CELE_T07C4.3 | |||||||
| NCBI | gene | 176451 | |||||||
| RefSeq | protein | NM_066887.7 | |||||||
| NM_001420555.1 | |||||||||
| NM_066888.8 | |||||||||
| TrEMBL | UniProtAcc | Q22290 | |||||||
| A0A8S4SL88 | |||||||||
| Q9U376 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A8S4SL88 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (4) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including RIC; distal tip cell; germ line; head mesodermal cell; and pharyngeal cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; glp-1; and gld-1 based on microarray; RNA-seq; and proteomic studies. Is affected by thirteen chemicals including bisphenol S; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T07C4.3a | |||||||
| T07C4.3b | |||||||||
| T07C4.3c | |||||||||
| Corresponding_transcript | T07C4.3a.1 | ||||||||
| T07C4.3b.1 | |||||||||
| T07C4.3c.1 | |||||||||
| Other_sequence | PT02748 | ||||||||
| CRC02812_1 | |||||||||
| CR03784 | |||||||||
| CR07897 | |||||||||
| CRC04464_1 | |||||||||
| CBC06682_1 | |||||||||
| CBC08092_1 | |||||||||
| CGC00708_1 | |||||||||
| Associated_feature | WBsf993986 | ||||||||
| WBsf993987 | |||||||||
| WBsf993988 | |||||||||
| WBsf225714 | |||||||||
| WBsf225715 | |||||||||
| Experimental_info | RNAi_result (30) | ||||||||
| Expr_pattern | Expr1020692 | ||||||||
| Expr1035095 | |||||||||
| Expr1156336 | |||||||||
| Expr2005959 | |||||||||
| Expr2024175 | |||||||||
| Drives_construct | WBCnstr00030560 | ||||||||
| Construct_product | WBCnstr00030560 | ||||||||
| Microarray_results | SMD_T07C4.3 | ||||||||
| SMD_T07C4.4 | |||||||||
| 175144_at | |||||||||
| 181494_s_at | |||||||||
| A_12_P111444 | |||||||||
| A_12_P120040 | |||||||||
| Aff_T07C4.3 | |||||||||
| GPL13394_WBGene00011560 | |||||||||
| GPL13914_T07C4.3 | |||||||||
| GPL14144_T07C4.3a_1447-1506_0.924_13_C | |||||||||
| GPL14144_T07C4.3a_1602-1661_0.941_6_B | |||||||||
| GPL14144_T07C4.3a_1679-1738_0.950_1_A | |||||||||
| GPL19516_CGZ0033902 | |||||||||
| GPL19516_CGZ0033903 | |||||||||
| GPL19516_CGZ0033904 | |||||||||
| GPL19516_CGZ0033905 | |||||||||
| GPL21109_T07C4.3a.1 | |||||||||
| GPL21109_T07C4.3a.2 | |||||||||
| GPL21109_T07C4.3b.2 | |||||||||
| GPL3518_CE00602 | |||||||||
| GPL8304_CE_WBGene00011560_A | |||||||||
| GPL8304_CE_WBGene00011560_B | |||||||||
| GPL8304_CE_WBGene00011560_C | |||||||||
| GPL8673_T07C4_3aP00454 | |||||||||
| GPL8673_T07C4_3aP01447 | |||||||||
| GPL8673_T07C4_3aP01840 | |||||||||
| GPL8673_T07C4_3bP00451 | |||||||||
| GPL8673_T07C4_3bP01444 | |||||||||
| GPL8673_T07C4_3bP01837 | |||||||||
| GPL9450_T07C4.3a | |||||||||
| GPL9450_T07C4.3b | |||||||||
| cea2.c.22708 | |||||||||
| cea2.d.37689 | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction (101) | |||||||||
| Map_info | Positive | Positive_clone | T07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 2.46562 | |||||||
| Reference | WBPaper00061547 | ||||||||
| Method | Gene |
