WormBase Tree Display for Gene: WBGene00011513
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WBGene00011513 | SMap | S_parent | Sequence | T06C12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-197 | Person_evidence | WBPerson655 | |||||
Sequence_name | T06C12.4 | ||||||||
Molecular_name | T06C12.4 | ||||||||
T06C12.4.1 | |||||||||
CE16354 | |||||||||
Other_name | CELE_T06C12.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | fbxa-197 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-197 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (30) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP5535 | ||||||||
Ortholog (34) | |||||||||
Paralog (222) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including I5 neuron; cholinergic neurons; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; manganese chloride; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T06C12.4 | |||||||
Corresponding_transcript | T06C12.4.1 | ||||||||
Other_sequence | CBC01996_1 | ||||||||
CBC02683_1 | |||||||||
Associated_feature | WBsf662137 | ||||||||
WBsf233052 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052628 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062357 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035257 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018281 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026732 | ||||||||
Expr1156233 | |||||||||
Expr2011511 | |||||||||
Expr2029748 | |||||||||
Drives_construct | WBCnstr00030597 | ||||||||
Construct_product | WBCnstr00030597 | ||||||||
Microarray_results | SMD_T06C12.4 | ||||||||
182533_at | |||||||||
A_12_P116997 | |||||||||
Aff_T06C12.4 | |||||||||
GPL14144_T06C12.4_112-171_0.860_48_A | |||||||||
GPL19516_CGZ0033685 | |||||||||
GPL21109_T06C12.4 | |||||||||
GPL3518_CE16354 | |||||||||
GPL8304_CE_WBGene00011513_A | |||||||||
GPL8304_CE_WBGene00011513_B | |||||||||
GPL8673_T06C12_4P00225 | |||||||||
GPL8673_T06C12_4P00603 | |||||||||
GPL8673_T06C12_4P01014 | |||||||||
GPL9450_T06C12.4 | |||||||||
cea2.i.43838 | |||||||||
Expression_cluster (105) | |||||||||
Interaction (58) | |||||||||
Map_info | Map | V | Position | 9.02871 | Error | 0.002877 | |||
Positive | Positive_clone | T06C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |