WormBase Tree Display for Gene: WBGene00011102
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WBGene00011102 | SMap | S_parent | Sequence | R07E3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R07E3.1 | |||||||
Molecular_name | R07E3.1a | ||||||||
R07E3.1a.1 | |||||||||
CE02295 | |||||||||
R07E3.1b | |||||||||
CE39608 | |||||||||
R07E3.1b.1 | |||||||||
Other_name | CELE_R07E3.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | R07E3.1 | ||||||||
DB_info | Database | AceView | gene | XK958 | |||||
WormQTL | gene | WBGene00011102 | |||||||
WormFlux | gene | WBGene00011102 | |||||||
NDB | locus_tag | CELE_R07E3.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011102|UniProtKB=Q21810 | |||||||
family | PTHR12411 | ||||||||
NCBI | gene | 181242 | |||||||
RefSeq | protein | NM_001047815.6 | |||||||
NM_001047816.5 | |||||||||
TREEFAM | TREEFAM_ID | TF318600 | |||||||
TrEMBL | UniProtAcc | Q21810 | |||||||
Q2L6U9 | |||||||||
UniProt_GCRP | UniProtAcc | Q21810 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (30) | |||||||||
Strain | WBStrain00032203 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00072946 | ||||||||
00072947 | |||||||||
00072948 | |||||||||
00072949 | |||||||||
00072950 | |||||||||
00072951 | |||||||||
00072952 | |||||||||
00072953 | |||||||||
00118398 | |||||||||
00118399 | |||||||||
Ortholog (38) | |||||||||
Paralog (28) | |||||||||
Structured_description | Automated_description | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be located in extracellular space. Is an ortholog of human CTSW (cathepsin W). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R07E3.1a | |||||||
R07E3.1b | |||||||||
Corresponding_transcript | R07E3.1a.1 | ||||||||
R07E3.1b.1 | |||||||||
Other_sequence (73) | |||||||||
Associated_feature | WBsf654326 | ||||||||
WBsf654327 | |||||||||
WBsf670949 | |||||||||
WBsf237859 | |||||||||
WBsf237860 | |||||||||
Experimental_info | RNAi_result | WBRNAi00089131 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076600 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017545 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034704 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051464 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115185 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019857 | ||||||||
Expr1034876 | |||||||||
Expr1155151 | |||||||||
Expr2005456 | |||||||||
Expr2023677 | |||||||||
Drives_construct | WBCnstr00030930 | ||||||||
Construct_product | WBCnstr00030930 | ||||||||
Microarray_results | SMD_R07E3.1 | ||||||||
189760_s_at | |||||||||
A_12_P111064 | |||||||||
A_12_P139355 | |||||||||
A_12_P139356 | |||||||||
Aff_R07E3.1 | |||||||||
GPL13394_WBGene00011102 | |||||||||
GPL13914_R07E3.1 | |||||||||
GPL14144_R07E3.1a_1055-1114_0.957_1_A | |||||||||
GPL14144_R07E3.1a_1109-1168_0.942_4_C | |||||||||
GPL14144_R07E3.1a_863-922_0.947_2_B | |||||||||
GPL19516_CGZ0031290 | |||||||||
GPL19516_CGZ0031291 | |||||||||
GPL19516_CGZ0031292 | |||||||||
GPL21109_R07E3.1a | |||||||||
GPL21109_R07E3.1b.2 | |||||||||
GPL3518_CE02295 | |||||||||
GPL8304_CE_WBGene00011102_A | |||||||||
GPL8673_R07E3_1aP00033 | |||||||||
GPL8673_R07E3_1aP00623 | |||||||||
GPL8673_R07E3_1aP00896 | |||||||||
GPL8673_R07E3_1bP00224 | |||||||||
GPL8673_R07E3_1bP00470 | |||||||||
GPL8673_R07E3_1bP00734 | |||||||||
GPL9450_R07E3.1 | |||||||||
cea2.c.47267 | |||||||||
Expression_cluster (191) | |||||||||
Interaction (78) | |||||||||
Map_info | Positive | Positive_clone | R07E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 1.97275 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00065819 | |||||||||
Method | Gene |