WormBase Tree Display for Gene: WBGene00011097

WBGene00011097 SMap: S_parent: Sequence: R07B7
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (31)
    Strain: WBStrain00036547
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (39)
    Paralog (42)
    Structured_description: Automated_description: Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus. Expressed in several structures, including anal sphincter muscle; hyp12; rectal gland cell; tail hypodermis; and vulva. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R07B7.13a
      R07B7.13b
    Corresponding_transcript: R07B7.13a.1
      R07B7.13b.1
    Associated_feature: WBsf647327
      WBsf661854
      WBsf978838
      WBsf232596
    Transcription_factor: WBTranscriptionFactor000906
  Experimental_info: RNAi_result: WBRNAi00110166 Inferred_automatically: RNAi_primary
      WBRNAi00070102 Inferred_automatically: RNAi_primary
      WBRNAi00110159 Inferred_automatically: RNAi_primary
      WBRNAi00051430 Inferred_automatically: RNAi_primary
      WBRNAi00051431 Inferred_automatically: RNAi_primary
      WBRNAi00110174 Inferred_automatically: RNAi_primary
      WBRNAi00110152 Inferred_automatically: RNAi_primary
      WBRNAi00110172 Inferred_automatically: RNAi_primary
      WBRNAi00017516 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7633
      Expr9030
      Expr9039
      Expr1019675
      Expr1034873
      Expr1155119
      Expr2014109
      Expr2032348
    Drives_construct: WBCnstr00012778
      WBCnstr00013684
      WBCnstr00030935
    Construct_product: WBCnstr00030935
    Microarray_results: SMD_R07B7.13
      190798_at
      A_12_P100546
      Aff_R07B7.13
      GPL13394_WBGene00011097
      GPL13914_R07B7.13
      GPL14144_R07B7.13_1058-1117_0.936_1_A
      GPL14144_R07B7.13_1179-1238_0.913_7_C
      GPL14144_R07B7.13_787-846_0.926_2_B
      GPL19516_CGZ0031238
      GPL19516_CGZ0031239
      GPL21109_R07B7.13a
      GPL21109_R07B7.13b
      GPL3518_CE06275
      GPL8304_CE_WBGene00011097_A
      GPL8304_CE_WBGene00011097_B
      GPL8673_R07B7_13P00121
      GPL8673_R07B7_13P00623
      GPL8673_R07B7_13P00919
      GPL9450_R07B7.13
      cea2.i.42395
    Expression_cluster (163)
    SAGE_tag: SAGE:tggctactaa Strand: Antisense
      SAGE:gattattcat Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000192780
      WBInteraction000226599
      WBInteraction000231492
      WBInteraction000272849
      WBInteraction000360272
      WBInteraction000363413
      WBInteraction000383455
      WBInteraction000386921
      WBInteraction000426767
      WBInteraction000444792
  Map_info: Map: V Position: 3.62984 Error: 0.001344
    Positive: Positive_clone: R07B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034540
    WBPaper00036257
    WBPaper00039677
    WBPaper00060760
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene