WormBase Tree Display for Gene: WBGene00009979
expand all nodes | collapse all nodes | view schema
WBGene00009979 | SMap | S_parent | Sequence | F53F1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cutl-1 | Person_evidence | WBPerson52 | |||
Sequence_name | F53F1.1 | ||||||
Molecular_name | F53F1.1 | ||||||
F53F1.1.1 | |||||||
CE47606 | |||||||
Other_name | CELE_F53F1.1 | Accession_evidence | NDB | BX284605 | |||
Public_name | cutl-1 | ||||||
DB_info | Database | AceView | gene | 5N884 | |||
WormQTL | gene | WBGene00009979 | |||||
WormFlux | gene | WBGene00009979 | |||||
NDB | locus_tag | CELE_F53F1.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009979|UniProtKB=Q9XVM7 | |||||
family | PTHR22907 | ||||||
NCBI | gene | 186168 | |||||
RefSeq | protein | NM_073920.4 | |||||
TREEFAM | TREEFAM_ID | TF315307 | |||||
TrEMBL | UniProtAcc | Q9XVM7 | |||||
UniProt_GCRP | UniProtAcc | Q9XVM7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cutl | ||||||
Allele (29) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00102626 | ||||||
Ortholog (17) | |||||||
Paralog (31) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F53F1.1 | |||||
Corresponding_CDS_history | F53F1.1:wp188 | ||||||
F53F1.1:wp227 | |||||||
F53F1.1:wp231 | |||||||
Corresponding_transcript | F53F1.1.1 | ||||||
Other_sequence | PT01957 | ||||||
BM01590 | |||||||
HC08770 | |||||||
Associated_feature | WBsf1001813 | ||||||
WBsf1001814 | |||||||
WBsf1001815 | |||||||
WBsf1001816 | |||||||
WBsf1020717 | |||||||
WBsf1020718 | |||||||
WBsf1020719 | |||||||
WBsf1020720 | |||||||
Experimental_info | RNAi_result | WBRNAi00048128 | Inferred_automatically | RNAi_primary | |||
WBRNAi00015512 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1022907 | ||||||
Expr1151938 | |||||||
Expr2010616 | |||||||
Expr2028856 | |||||||
Microarray_results | SMD_F53F1.1 | ||||||
SMD_F53F1.1:2 | |||||||
188336_at | |||||||
A_12_P114481 | |||||||
Aff_F53F1.1 | |||||||
GPL13394_WBGene00009979 | |||||||
GPL13914_F53F1.1 | |||||||
GPL14144_F53F1.1_1038-1097_0.937_8_B | |||||||
GPL14144_F53F1.1_792-851_0.922_18_C | |||||||
GPL14144_F53F1.1_898-957_0.955_2_A | |||||||
GPL19516_CGZ0011473 | |||||||
GPL19516_CGZ0023449 | |||||||
GPL21109_Cat_F53F1.1 | |||||||
GPL21109_F53F1.1 | |||||||
GPL21109_F53F1.12 | |||||||
GPL3518_CE10932 | |||||||
GPL8304_CE_WBGene00009979_A | |||||||
GPL8673_F53F1_1P00026 | |||||||
GPL8673_F53F1_1P00484 | |||||||
GPL8673_F53F1_1P00864 | |||||||
GPL9450_F53F1.1 | |||||||
cea2.i.39714 | |||||||
Expression_cluster (50) | |||||||
Interaction | WBInteraction000370383 | ||||||
Map_info | Map | V | Position | 5.25536 | Error | 0.005791 | |
Positive | Positive_clone | F53F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |