WormBase Tree Display for Gene: WBGene00009940
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WBGene00009940 | SMap | S_parent | Sequence | F52F12 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | strl | |||||
Allele (24) | ||||||
Strain | WBStrain00037510 | |||||
In_cluster | conserved_miRNA_siRNA_cluster | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00030887 | |||||
00030888 | ||||||
00030889 | ||||||
00030890 | ||||||
00117496 | ||||||
Ortholog (44) | ||||||
Paralog | WBGene00012127 | Caenorhabditis elegans | From_analysis | TreeFam | ||
WBGene00010505 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00017826 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | F52F12.7 is orthologous to the human gene STEROIDOGENIC ACUTE REGULATORY PROTEIN (STAR; OMIM:600617), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | ||
WBPerson567 | ||||||
Date_last_updated | 06 Aug 2004 00:00:00 | |||||
Automated_description | Predicted to enable lipid binding activity. Predicted to be involved in vesicle tethering to endoplasmic reticulum. Predicted to be located in endoplasmic reticulum membrane; endoplasmic reticulum-endosome membrane contact site; and late endosome membrane. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia. Is an ortholog of human STAR (steroidogenic acute regulatory protein). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0050811 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11359) | |
Molecular_info | Corresponding_CDS | F52F12.7a | ||||
F52F12.7b | ||||||
Corresponding_CDS_history | F52F12.7:wp192 | |||||
Corresponding_transcript | F52F12.7a.1 | |||||
F52F12.7b.1 | ||||||
Other_sequence (17) | ||||||
Associated_feature | WBsf655797 | |||||
WBsf656811 | ||||||
WBsf656812 | ||||||
WBsf218372 | ||||||
Experimental_info | RNAi_result | WBRNAi00048013 | Inferred_automatically | RNAi_primary | ||
WBRNAi00032633 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1028193 | |||||
Expr1034331 | ||||||
Expr1151828 | ||||||
Expr2017097 | ||||||
Expr2035233 | ||||||
Drives_construct | WBCnstr00031799 | |||||
Construct_product | WBCnstr00031799 | |||||
Microarray_results | SMD_F52F12.7 | |||||
193629_at | ||||||
A_12_P119684 | ||||||
Aff_F52F12.7 | ||||||
GPL13394_WBGene00009940 | ||||||
GPL13914_F52F12.7 | ||||||
GPL14144_F52F12.7_446-505_0.940_2_B | ||||||
GPL14144_F52F12.7_657-716_0.938_4_A | ||||||
GPL14144_F52F12.7_691-750_0.925_10_C | ||||||
GPL19516_CGZ0023230 | ||||||
GPL19516_CGZ0023231 | ||||||
GPL19516_CGZ0023233 | ||||||
GPL21109_F52F12.7a | ||||||
GPL21109_F52F12.9 | ||||||
GPL3518_CE10852 | ||||||
GPL8304_CE_WBGene00009940_A | ||||||
GPL8304_CE_WBGene00009940_B | ||||||
GPL8673_F52F12_7P00132 | ||||||
GPL8673_F52F12_7P00364 | ||||||
GPL8673_F52F12_7P00633 | ||||||
GPL9450_F52F12.7 | ||||||
cea2.p.11306 | ||||||
Expression_cluster (135) | ||||||
Interaction | WBInteraction000264141 | |||||
WBInteraction000354274 | ||||||
WBInteraction000373343 | ||||||
WBInteraction000420659 | ||||||
WBInteraction000459459 | ||||||
WBInteraction000461309 | ||||||
Map_info | Map | I | Position | 4.06833 | ||
Positive | Positive_clone | F52F12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00048210 | ||||||
WBPaper00055090 | ||||||
WBPaper00057279 | ||||||
WBPaper00064789 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |