WormBase Tree Display for Gene: WBGene00009726
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| WBGene00009726 | SMap | S_parent | Sequence | F45E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tbc-13 | Person_evidence | WBPerson524 | |||||
| WBPerson293 | |||||||||
| Sequence_name | F45E6.3 | ||||||||
| Molecular_name | F45E6.3 | ||||||||
| F45E6.3.1 | |||||||||
| CE53385 | |||||||||
| F45E6.3.2 | |||||||||
| Other_name | CELE_F45E6.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tbc-13 | ||||||||
| DB_info | Database | AceView | gene | XN109 | |||||
| WormQTL | gene | WBGene00009726 | |||||||
| WormFlux | gene | WBGene00009726 | |||||||
| NDB | locus_tag | CELE_F45E6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009726|UniProtKB=Q20436 | |||||||
| family | PTHR22957 | ||||||||
| NCBI | gene | 181406 | |||||||
| RefSeq | protein | NM_001373530.1 | |||||||
| TREEFAM | TREEFAM_ID | TF105911 | |||||||
| TrEMBL | UniProtAcc | Q20436 | |||||||
| UniProt_GCRP | UniProtAcc | Q20436 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Jun 2008 18:34:24 | WBPerson2970 | Name_change | CGC_name | tbc-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tbc | ||||||||
| Allele (118) | |||||||||
| Strain | WBStrain00002984 | ||||||||
| WBStrain00032212 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00068152 | ||||||||
| 00068153 | |||||||||
| Contained_in_operon | CEOPX108 | ||||||||
| Ortholog (33) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activator activity. Predicted to be involved in intracellular protein transport. Is an ortholog of human TBC1D13 (TBC1 domain family member 13). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45E6.3 | |||||||
| Corresponding_CDS_history | F45E6.3:wp101 | ||||||||
| F45E6.3:wp271 | |||||||||
| Corresponding_transcript | F45E6.3.1 | ||||||||
| F45E6.3.2 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf1007313 | ||||||||
| WBsf1007314 | |||||||||
| WBsf1007315 | |||||||||
| WBsf1024057 | |||||||||
| WBsf236496 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001592 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015029 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047417 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032311 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1287 | ||||||||
| Expr6079 | |||||||||
| Expr1026590 | |||||||||
| Expr1034254 | |||||||||
| Expr1151259 | |||||||||
| Expr2017323 | |||||||||
| Expr2035459 | |||||||||
| Drives_construct | WBCnstr00003486 | ||||||||
| WBCnstr00031963 | |||||||||
| Construct_product | WBCnstr00031963 | ||||||||
| Microarray_results | SMD_F45E6.3 | ||||||||
| SMD_F45E6.3:2 | |||||||||
| 174409_at | |||||||||
| 190559_at | |||||||||
| A_12_P120084 | |||||||||
| Aff_F45E6.3 | |||||||||
| GPL13394_WBGene00009726 | |||||||||
| GPL13914_F45E6.3 | |||||||||
| GPL14144_F45E6.3_1248-1307_0.931_3_A | |||||||||
| GPL14144_F45E6.3_694-753_0.911_8_B | |||||||||
| GPL14144_F45E6.3_720-779_0.874_26_C | |||||||||
| GPL19516_CGZ0021897 | |||||||||
| GPL21109_F45E6.3 | |||||||||
| GPL3518_CE17829 | |||||||||
| GPL8304_CE_WBGene00009726_A | |||||||||
| GPL8304_CE_WBGene00009726_B | |||||||||
| GPL8673_F45E6_3P00090 | |||||||||
| GPL8673_F45E6_3P00426 | |||||||||
| GPL8673_F45E6_3P01290 | |||||||||
| GPL9450_F45E6.3 | |||||||||
| cea2.p.144684 | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction | WBInteraction000298841 | ||||||||
| WBInteraction000422583 | |||||||||
| WBInteraction000539154 | |||||||||
| Map_info | Map | X | Position | 7.12031 | Error | 0.002616 | |||
| Positive | Positive_clone | F45E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
