WormBase Tree Display for Gene: WBGene00009092
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| WBGene00009092 | SMap | S_parent | Sequence | F23H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tomm-20 | Person_evidence | WBPerson304 | |||||
| Sequence_name | F23H12.2 | ||||||||
| Molecular_name | F23H12.2 | ||||||||
| F23H12.2.1 | |||||||||
| CE05705 | |||||||||
| Other_name | CELE_F23H12.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | tomm-20 | ||||||||
| DB_info | Database | AceView | gene | 5M822 | |||||
| WormQTL | gene | WBGene00009092 | |||||||
| WormFlux | gene | WBGene00009092 | |||||||
| NDB | locus_tag | CELE_F23H12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009092|UniProtKB=Q19766 | |||||||
| family | PTHR12430 | ||||||||
| NCBI | gene | 179691 | |||||||
| RefSeq | protein | NM_073691.6 | |||||||
| SwissProt | UniProtAcc | Q19766 | |||||||
| TREEFAM | TREEFAM_ID | TF106200 | |||||||
| UniProt_GCRP | UniProtAcc | Q19766 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Apr 2010 11:09:36 | WBPerson2970 | Name_change | CGC_name | tomm-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tomm | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00051241 | ||||||||
| WBStrain00054689 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP5518 | ||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00009313 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable mitochondrion targeting sequence binding activity. Predicted to contribute to protein transmembrane transporter activity. Predicted to be involved in protein import into mitochondrial matrix and tRNA import into mitochondrion. Predicted to be located in mitochondrial outer membrane. Predicted to be part of mitochondrial outer membrane translocase complex. Is an ortholog of human TOMM20 (translocase of outer mitochondrial membrane 20). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F23H12.2 | |||||||
| Corresponding_transcript | F23H12.2.1 | ||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf982012 | ||||||||
| WBsf1001567 | |||||||||
| WBsf234666 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr14344 | ||||||||
| Expr1019700 | |||||||||
| Expr1033961 | |||||||||
| Expr1149369 | |||||||||
| Expr2017453 | |||||||||
| Expr2035592 | |||||||||
| Drives_construct (2) | |||||||||
| Construct_product (14) | |||||||||
| Microarray_results | SMD_F23H12.2 | ||||||||
| 171936_s_at | |||||||||
| 192632_s_at | |||||||||
| A_12_P120143 | |||||||||
| Aff_F23H12.2 | |||||||||
| GPL13394_WBGene00009092 | |||||||||
| GPL13914_F23H12.2 | |||||||||
| GPL14144_F23H12.2_327-386_0.940_2_A | |||||||||
| GPL14144_F23H12.2_461-520_0.953_1_B | |||||||||
| GPL14144_F23H12.2_73-132_0.930_4_C | |||||||||
| GPL19516_CGZ0017784 | |||||||||
| GPL21109_F23H12.2 | |||||||||
| GPL3518_CE05705 | |||||||||
| GPL8304_CE_WBGene00009092_A | |||||||||
| GPL8673_F23H12_2P00059 | |||||||||
| GPL8673_F23H12_2P00157 | |||||||||
| GPL8673_F23H12_2P00466 | |||||||||
| GPL9450_F23H12.2 | |||||||||
| cea2.c.35462 | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (123) | |||||||||
| Map_info | Map | V | Position | 4.0024 | Error | 0.001049 | |||
| Positive | Positive_clone | F23H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
