WormBase Tree Display for Gene: WBGene00007605
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| WBGene00007605 | SMap | S_parent | Sequence | C15C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | hrg-7 | Person_evidence | WBPerson1802 | |||||
| Sequence_name | C15C8.3 | ||||||||
| Molecular_name | C15C8.3a | ||||||||
| C15C8.3a.1 | |||||||||
| CE05287 | |||||||||
| C15C8.3b | |||||||||
| CE45278 | |||||||||
| C15C8.3b.1 | |||||||||
| Other_name | asp-10 | Person_evidence | WBPerson261 | ||||||
| CELE_C15C8.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | hrg-7 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-10 | ||||
| 3 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | hrg-7 | ||||
| Other_name | asp-10 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hrg | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Expressed in amphid neurons and phasmid neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15C8.3a | |||||||
| C15C8.3b | |||||||||
| Corresponding_transcript | C15C8.3a.1 | ||||||||
| C15C8.3b.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf647402 | ||||||||
| WBsf1001638 | |||||||||
| WBsf1020611 | |||||||||
| WBsf232692 | |||||||||
| WBsf232693 | |||||||||
| WBsf232694 | |||||||||
| WBsf232695 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028917 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022285 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088989 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115182 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14510 | ||||||||
| Expr14511 | |||||||||
| Expr1022565 | |||||||||
| Expr1144657 | |||||||||
| Expr2009459 | |||||||||
| Expr2027697 | |||||||||
| Drives_construct | WBCnstr00033613 | ||||||||
| WBCnstr00041062 | |||||||||
| WBCnstr00041063 | |||||||||
| Construct_product (2) | |||||||||
| Microarray_results | SMD_C15C8.3 | ||||||||
| 190619_at | |||||||||
| A_12_P102049 | |||||||||
| Aff_C15C8.3 | |||||||||
| GPL13394_WBGene00007605 | |||||||||
| GPL13914_C15C8.3 | |||||||||
| GPL14144_C15C8.3_1113-1172_0.946_1_A | |||||||||
| GPL14144_C15C8.3_746-805_0.931_3_B | |||||||||
| GPL14144_C15C8.3_928-987_0.907_8_C | |||||||||
| GPL19516_CGZ0004734 | |||||||||
| GPL19516_CGZ0004735 | |||||||||
| GPL19516_CGZ0004736 | |||||||||
| GPL21109_C15C8.3a | |||||||||
| GPL3518_CE05287 | |||||||||
| GPL8304_CE_WBGene00007605_A | |||||||||
| GPL8304_CE_WBGene00007605_B | |||||||||
| GPL8673_C15C8_3P00196 | |||||||||
| GPL8673_C15C8_3P00875 | |||||||||
| GPL8673_C15C8_3P01188 | |||||||||
| GPL9450_C15C8.3 | |||||||||
| cea2.c.33974 | |||||||||
| Expression_cluster (365) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | V | Position | 4.61868 | |||||
| Positive | Positive_clone | C15C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056416 | |||||||||
| WBPaper00061065 | |||||||||
| WBPaper00061178 | |||||||||
| WBPaper00064607 | |||||||||
| WBPaper00065560 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
