WormBase Tree Display for Gene: WBGene00007400

WBGene00007400 SMap: S_parent: Sequence: C07A9
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: bud
    Allele (27)
    Strain: WBStrain00051144
    RNASeq_FPKM (74)
    GO_annotation: 00041550
      00041551
      00041552
      00041553
      00041554
      00041555
      00041556
      00115537
    Contained_in_operon: CEOP3612
    Ortholog (34)
    Structured_description: Automated_description: Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Is an ortholog of human BUD31 (BUD31 homolog). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07A9.2
    Corresponding_transcript: C07A9.2.1
      C07A9.2.2
    Other_sequence (74)
    Associated_feature: WBsf651395
      WBsf651396
      WBsf667314
      WBsf667315
      WBsf667316
      WBsf993765
      WBsf993766
      WBsf1015654
      WBsf1015655
      WBsf227352
  Experimental_info: RNAi_result (24)
    Expr_pattern: Expr1015684
      Expr1033185
      Expr1144053
      Expr2009682
      Expr2027921
    Drives_construct: WBCnstr00033770
    Construct_product: WBCnstr00033770
    Microarray_results: SMD_C07A9.2
      173809_s_at
      A_12_P113580
      A_12_P157300
      A_12_P157301
      A_12_P157302
      A_12_P157303
      Aff_C07A9.2
      GPL13394_WBGene00007400
      GPL13914_C07A9.2
      GPL14144_C07A9.2_249-308_0.919_15_C
      GPL14144_C07A9.2_297-356_0.944_3_B
      GPL14144_C07A9.2_381-440_0.971_1_A
      GPL19516_CGZ0003155
      GPL19516_CGZ0003156
      GPL21109_C07A9.2.1
      GPL3518_CE00499
      GPL8304_CE_WBGene00007400_A
      GPL8673_C07A9_2P00038
      GPL8673_C07A9_2P00231
      GPL8673_C07A9_2P00318
      GPL9450_C07A9.2
      cea2.c.17055
    Expression_cluster (135)
    Interaction (102)
  Map_info: Map: III Position: 0.890235
    Positive: Positive_clone: C07A9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00045396
    WBPaper00048493
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene