WormBase Tree Display for Gene: WBGene00007400
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WBGene00007400 | SMap | S_parent | Sequence | C07A9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | bud-31 | |||||||
Sequence_name | C07A9.2 | ||||||||
Molecular_name | C07A9.2 | ||||||||
C07A9.2.1 | |||||||||
CE00499 | |||||||||
C07A9.2.2 | |||||||||
Other_name | 3J784 | Accession_evidence | EMBL | AF303257 | |||||
CELE_C07A9.2 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | bud-31 | ||||||||
DB_info | Database | AceView | gene | 3K784 | |||||
WormQTL | gene | WBGene00007400 | |||||||
WormFlux | gene | WBGene00007400 | |||||||
NDB | locus_tag | CELE_C07A9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007400|UniProtKB=P34313 | |||||||
family | PTHR19411 | ||||||||
NCBI | gene | 176368 | |||||||
RefSeq | protein | NM_001379868.1 | |||||||
SwissProt | UniProtAcc | P34313 | |||||||
TREEFAM | TREEFAM_ID | TF105609 | |||||||
UniProt_GCRP | UniProtAcc | P34313 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | bud-31 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | bud | ||||||||
Allele (27) | |||||||||
Strain | WBStrain00051144 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00041550 | ||||||||
00041551 | |||||||||
00041552 | |||||||||
00041553 | |||||||||
00041554 | |||||||||
00041555 | |||||||||
00041556 | |||||||||
00115537 | |||||||||
Contained_in_operon | CEOP3612 | ||||||||
Ortholog (34) | |||||||||
Structured_description | Automated_description | Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Is an ortholog of human BUD31 (BUD31 homolog). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C07A9.2 | |||||||
Corresponding_transcript (2) | |||||||||
Other_sequence (74) | |||||||||
Associated_feature | WBsf651395 | ||||||||
WBsf651396 | |||||||||
WBsf667314 | |||||||||
WBsf667315 | |||||||||
WBsf667316 | |||||||||
WBsf993765 | |||||||||
WBsf993766 | |||||||||
WBsf1015654 | |||||||||
WBsf1015655 | |||||||||
WBsf227352 | |||||||||
Experimental_info | RNAi_result (24) | ||||||||
Expr_pattern | Expr1015684 | ||||||||
Expr1033185 | |||||||||
Expr1144053 | |||||||||
Expr2009682 | |||||||||
Expr2027921 | |||||||||
Drives_construct | WBCnstr00033770 | ||||||||
Construct_product | WBCnstr00033770 | ||||||||
Microarray_results | SMD_C07A9.2 | ||||||||
173809_s_at | |||||||||
A_12_P113580 | |||||||||
A_12_P157300 | |||||||||
A_12_P157301 | |||||||||
A_12_P157302 | |||||||||
A_12_P157303 | |||||||||
Aff_C07A9.2 | |||||||||
GPL13394_WBGene00007400 | |||||||||
GPL13914_C07A9.2 | |||||||||
GPL14144_C07A9.2_249-308_0.919_15_C | |||||||||
GPL14144_C07A9.2_297-356_0.944_3_B | |||||||||
GPL14144_C07A9.2_381-440_0.971_1_A | |||||||||
GPL19516_CGZ0003155 | |||||||||
GPL19516_CGZ0003156 | |||||||||
GPL21109_C07A9.2.1 | |||||||||
GPL3518_CE00499 | |||||||||
GPL8304_CE_WBGene00007400_A | |||||||||
GPL8673_C07A9_2P00038 | |||||||||
GPL8673_C07A9_2P00231 | |||||||||
GPL8673_C07A9_2P00318 | |||||||||
GPL9450_C07A9.2 | |||||||||
cea2.c.17055 | |||||||||
Expression_cluster (135) | |||||||||
Interaction (102) | |||||||||
Map_info | Map | III | Position | 0.890235 | |||||
Positive | Positive_clone | C07A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00045396 | |||||||||
WBPaper00048493 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |