WormBase Tree Display for Gene: WBGene00007072
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WBGene00007072 | SMap | S_parent | Sequence | AC3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ugt-1 | Person_evidence | WBPerson1208 | |||
Sequence_name | AC3.7 | ||||||
Molecular_name | AC3.7 | ||||||
AC3.7.1 | |||||||
CE05137 | |||||||
Other_name | dod-15 | ||||||
CELE_AC3.7 | Accession_evidence | NDB | BX284605 | ||||
Public_name | ugt-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ugt | ||||||
Allele (26) | |||||||
Strain | WBStrain00032739 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00057950 | ||||||
00057951 | |||||||
00057952 | |||||||
00057953 | |||||||
00057954 | |||||||
00057955 | |||||||
00115293 | |||||||
Ortholog (61) | |||||||
Paralog (74) | |||||||
Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in osteoporosis. Is an ortholog of several human genes including UGT2B10 (UDP glucuronosyltransferase family 2 member B10); UGT2B4 (UDP glucuronosyltransferase family 2 member B4); and UGT2B7 (UDP glucuronosyltransferase family 2 member B7). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:11476 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12547) | ||
Molecular_info | Corresponding_CDS | AC3.7 | |||||
Corresponding_transcript | AC3.7.1 | ||||||
Associated_feature | WBsf647154 | ||||||
WBsf232378 | |||||||
WBsf232379 | |||||||
Experimental_info | RNAi_result | WBRNAi00009514 | Inferred_automatically | RNAi_primary | |||
WBRNAi00027918 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070153 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00063199 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038599 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1016707 | ||||||
Expr1033039 | |||||||
Expr1142807 | |||||||
Expr2017764 | |||||||
Expr2035902 | |||||||
Drives_construct | WBCnstr00034018 | ||||||
Construct_product | WBCnstr00016595 | ||||||
WBCnstr00034018 | |||||||
Microarray_results | SMD_AC3.7 | ||||||
SMD_AC3.7:2 | |||||||
190879_at | |||||||
A_12_P109118 | |||||||
Aff_AC3.7 | |||||||
GPL13394_WBGene00007072 | |||||||
GPL13914_AC3.7 | |||||||
GPL14144_AC3.7_1046-1105_0.896_11_C | |||||||
GPL14144_AC3.7_1166-1225_0.908_4_B | |||||||
GPL14144_AC3.7_1448-1507_0.929_1_A | |||||||
GPL19516_CGZ0000030 | |||||||
GPL21109_AC3.7 | |||||||
GPL3518_CE05137 | |||||||
GPL8304_CE_WBGene00007072_A | |||||||
GPL8304_CE_WBGene00007072_C | |||||||
GPL8673_AC3_7P00309 | |||||||
GPL8673_AC3_7P01117 | |||||||
GPL8673_AC3_7P01261 | |||||||
GPL9450_AC3.7 | |||||||
cea2.p.106691 | |||||||
Expression_cluster (256) | |||||||
Interaction | WBInteraction000235196 | ||||||
WBInteraction000254797 | |||||||
WBInteraction000294759 | |||||||
WBInteraction000325712 | |||||||
WBInteraction000358163 | |||||||
WBInteraction000418307 | |||||||
WBInteraction000473169 | |||||||
WBInteraction000520100 | |||||||
WBInteraction000546949 | |||||||
WBInteraction000567597 | |||||||
Map_info | Map | V | Position | 2.5449 | Error | 0.000503 | |
Positive | Positive_clone | AC3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005976 | ||||||
WBPaper00038491 | |||||||
WBPaper00038729 | |||||||
WBPaper00042865 | |||||||
WBPaper00044578 | |||||||
WBPaper00055090 | |||||||
WBPaper00055433 | |||||||
WBPaper00057608 | |||||||
WBPaper00062838 | |||||||
WBPaper00064707 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |