WormBase Tree Display for Gene: WBGene00004451
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| WBGene00004451 | SMap | S_parent | Sequence | C54C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rpl-37 | |||||||
| Sequence_name | C54C6.1 | ||||||||
| Molecular_name | C54C6.1 | ||||||||
| C54C6.1.1 | |||||||||
| CE05493 | |||||||||
| Other_name | CELE_C54C6.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rpl-37 | ||||||||
| DB_info | Database | AceView | gene | 3E619 | |||||
| WormQTL | gene | WBGene00004451 | |||||||
| WormFlux | gene | WBGene00004451 | |||||||
| NDB | locus_tag | CELE_C54C6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004451|UniProtKB=P49622 | |||||||
| family | PTHR10768 | ||||||||
| NCBI | gene | 175460 | |||||||
| RefSeq | protein | NM_065326.6 | |||||||
| SwissProt | UniProtAcc | P49622 | |||||||
| TREEFAM | TREEFAM_ID | TF300260 | |||||||
| UniProt_GCRP | UniProtAcc | P49622 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpl | ||||||||
| Allele | WBVar01500082 | ||||||||
| WBVar02150311 | |||||||||
| WBVar01578820 | |||||||||
| WBVar01578821 | |||||||||
| WBVar01498832 | |||||||||
| WBVar01837365 | |||||||||
| WBVar01479547 | |||||||||
| Legacy_information | [C.elegansII] NMK. Transspliced to SL1; encodes predicted ribosomal protein L37 (54% identical to rat). [Bektesh et al. 1988; DH] | ||||||||
| Orthologous to yeast (S.cerevisiae) ribosomal protein rpl37 using blastP | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00012179 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | C54C6.1 | |||||||
| Corresponding_transcript | C54C6.1.1 | ||||||||
| Other_sequence (119) | |||||||||
| Associated_feature | WBsf224622 | ||||||||
| Experimental_info | RNAi_result (22) | ||||||||
| Expr_pattern | Expr1018871 | ||||||||
| Expr1032255 | |||||||||
| Expr1147078 | |||||||||
| Expr2015470 | |||||||||
| Expr2033705 | |||||||||
| Drives_construct | WBCnstr00035475 | ||||||||
| Construct_product | WBCnstr00035475 | ||||||||
| Microarray_results | SMD_C54C6.1 | ||||||||
| 193079_s_at | |||||||||
| A_12_P118680 | |||||||||
| A_12_P138680 | |||||||||
| Aff_C54C6.1 | |||||||||
| GPL14144_C54C6.1_217-276_0.967_1_A | |||||||||
| GPL19516_CGZ0010455 | |||||||||
| GPL19516_CGZ0010456 | |||||||||
| GPL21109_C54C6.1.1 | |||||||||
| GPL3518_CE05493 | |||||||||
| GPL9450_C54C6.1 | |||||||||
| cea2.d.17777 | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (139) | |||||||||
| Map_info | Map | III | Position | -5.94768 | |||||
| Positive | Positive_clone | C54C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| DH#SL005 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004403 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
