WormBase Tree Display for Gene: WBGene00004429
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| WBGene00004429 | SMap | S_parent | Sequence | Y48G8AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rpl-17 | |||||||
| Sequence_name | Y48G8AL.8 | ||||||||
| Molecular_name | Y48G8AL.8 | ||||||||
| Y48G8AL.8.1 | |||||||||
| CE22195 | |||||||||
| Other_name | CELE_Y48G8AL.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | rpl-17 | ||||||||
| DB_info | Database | AceView | gene | 1B631 | |||||
| WormQTL | gene | WBGene00004429 | |||||||
| WormFlux | gene | WBGene00004429 | |||||||
| NDB | locus_tag | CELE_Y48G8AL.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004429|UniProtKB=Q9BL19 | |||||||
| family | PTHR11593 | ||||||||
| NCBI | gene | 171692 | |||||||
| RefSeq | protein | NM_170799.7 | |||||||
| SwissProt | UniProtAcc | Q9BL19 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BL19 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info (9) | |||||||||
| Molecular_info | Corresponding_CDS | Y48G8AL.8 | |||||||
| Corresponding_CDS_history | Y48G8AL.8b:wp253 | ||||||||
| Corresponding_transcript | Y48G8AL.8.1 | ||||||||
| Other_sequence (418) | |||||||||
| Associated_feature | WBsf643044 | ||||||||
| WBsf655890 | |||||||||
| WBsf980939 | |||||||||
| WBsf217190 | |||||||||
| WBsf217191 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00003552 | ||||||||
| WBCnstr00009755 | |||||||||
| WBCnstr00009756 | |||||||||
| WBCnstr00035493 | |||||||||
| Construct_product | WBCnstr00035493 | ||||||||
| Antibody | WBAntibody00002468 | ||||||||
| Microarray_results | SMD_Y48G8A_3945.C | ||||||||
| 173380_at | |||||||||
| A_12_P119729 | |||||||||
| A_12_P157958 | |||||||||
| A_12_P157959 | |||||||||
| A_12_P158430 | |||||||||
| A_12_P158431 | |||||||||
| A_12_P158432 | |||||||||
| A_12_P158433 | |||||||||
| A_12_P158434 | |||||||||
| A_12_P158525 | |||||||||
| Aff_Y48G8A_3945.C | |||||||||
| GPL13394_WBGene00004429 | |||||||||
| GPL13914_Y48G8AL.8 | |||||||||
| GPL14144_Y48G8AL.8a_148-207_0.873_12_C | |||||||||
| GPL14144_Y48G8AL.8a_340-399_0.902_9_B | |||||||||
| GPL14144_Y48G8AL.8a_499-558_0.971_1_A | |||||||||
| GPL19516_CGZ0013183 | |||||||||
| GPL19516_CGZ0047273 | |||||||||
| GPL19516_CGZ0047274 | |||||||||
| GPL21109_Y48G8AL.8a | |||||||||
| GPL3518_CE22195 | |||||||||
| GPL8304_CE_WBGene00004429_A | |||||||||
| GPL8304_CE_WBGene00004429_B | |||||||||
| GPL8673_Y48G8AL_8aP00203 | |||||||||
| GPL8673_Y48G8AL_8aP00225 | |||||||||
| GPL8673_Y48G8AL_8aP00229 | |||||||||
| GPL8673_Y48G8AL_8bP00111 | |||||||||
| GPL8673_Y48G8AL_8bP00209 | |||||||||
| GPL8673_Y48G8AL_8bP00270 | |||||||||
| GPL9450_Y48G8AL.8a | |||||||||
| cea2.d.08110 | |||||||||
| cea2.d.44610 | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction (304) | |||||||||
| Map_info | Map | I | Position | -16.9301 | Error | 0.002606 | |||
| Positive | Positive_clone | Y48G8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025088 | ||||||||
| WBPaper00028984 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064023 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00064934 | |||||||||
| WBPaper00065861 | |||||||||
| Remark | rpl-17 is described as "Orthologous to yeast (S.cerevisiae) ribosomal protein rpl17 using blastP". BlastP with sp|P05740|R171_YEAST gives one hit in the genome with E < 0.01, namely to Y48G8AL.8a/b | Person_evidence | WBPerson567 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
