WormBase Tree Display for Gene: WBGene00003722
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WBGene00003722 | SMap | S_parent | Sequence | R11G11 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nhr | |||||
Allele (185) | ||||||
Strain | WBStrain00035265 | |||||
WBStrain00035266 | ||||||
WBStrain00035267 | ||||||
WBStrain00036358 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00029036 | |||||
00029037 | ||||||
00029038 | ||||||
00111685 | ||||||
00111686 | ||||||
00111687 | ||||||
00111688 | ||||||
Ortholog (25) | ||||||
Paralog (218) | ||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in excretory cell and vulva. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R11G11.1 | ||||
Corresponding_CDS_history | R11G11.1:wp93 | |||||
R11G11.1:wp188 | ||||||
Corresponding_transcript | R11G11.1.1 | |||||
Other_sequence | CR04533 | |||||
Associated_feature | WBsf646639 | |||||
WBsf981882 | ||||||
WBsf231347 | ||||||
Transcription_factor | WBTranscriptionFactor000262 | |||||
Experimental_info | RNAi_result | WBRNAi00017764 | Inferred_automatically | RNAi_primary | ||
WBRNAi00115850 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00034868 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00051806 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (11) | ||||||
Drives_construct | WBCnstr00001056 | |||||
WBCnstr00001088 | ||||||
WBCnstr00001089 | ||||||
WBCnstr00012516 | ||||||
WBCnstr00012783 | ||||||
Microarray_results | SMD_R11G11.1 | |||||
190237_at | ||||||
A_12_P109463 | ||||||
Aff_R11G11.1 | ||||||
GPL13394_WBGene00003722 | ||||||
GPL13914_R11G11.1 | ||||||
GPL14144_R11G11.1_349-408_0.904_14_C | ||||||
GPL14144_R11G11.1_411-470_0.906_13_B | ||||||
GPL14144_R11G11.1_737-796_0.929_2_A | ||||||
GPL19516_CGZ0012215 | ||||||
GPL19516_CGZ0031971 | ||||||
GPL21109_Cat_R11G11.1 | ||||||
GPL21109_R11G11.1 | ||||||
GPL3518_CE12740 | ||||||
GPL8304_CE_WBGene00003722_A | ||||||
GPL8673_R11G11_1P00017 | ||||||
GPL8673_R11G11_1P00317 | ||||||
GPL8673_R11G11_1P00772 | ||||||
GPL9450_R11G11.1 | ||||||
cea2.i.42851 | ||||||
Expression_cluster (130) | ||||||
Map_info | Map | V | Position | -19.98 | ||
Positive | Positive_clone | R11G11 | Inferred_automatically | From CDS info | ||
From sequence, transcript, pseudogene data | ||||||
Mapping_data | Multi_point | 5351 | ||||
5368 | ||||||
Pseudo_map_position | ||||||
Reference | WBPaper00006465 | |||||
WBPaper00026592 | ||||||
WBPaper00027309 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |