WormBase Tree Display for Gene: WBGene00001448
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| WBGene00001448 | SMap | S_parent | Sequence | C03G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | flp-5 | Person_evidence | WBPerson369 | |||||
| Sequence_name | C03G5.7 | ||||||||
| Molecular_name | C03G5.7 | ||||||||
| C03G5.7.1 | |||||||||
| CE48316 | |||||||||
| C03G5.7.2 | |||||||||
| Other_name | CELE_C03G5.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | flp-5 | ||||||||
| DB_info | Database | AceView | gene | XJ149 | |||||
| WormQTL | gene | WBGene00001448 | |||||||
| WormFlux | gene | WBGene00001448 | |||||||
| NDB | locus_tag | CELE_C03G5.7 | |||||||
| NCBI | gene | 181104 | |||||||
| RefSeq | protein | NM_001381040.1 | |||||||
| SwissProt | UniProtAcc | O61466 | |||||||
| TREEFAM | TREEFAM_ID | TF321395 | |||||||
| UniProt_GCRP | UniProtAcc | O61466 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00029161 | ||||||||
| WBStrain00002022 | |||||||||
| WBStrain00037763 | |||||||||
| WBStrain00055138 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036027 | ||||||||
| 00036028 | |||||||||
| 00036029 | |||||||||
| 00036030 | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00010575 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Concise_description | flp-5 encodes a predicted FMRFamide-like peptide neurotransmitter that increases action potential frequency in the pharyngeal muscle when applied to the pharynx of dissected worms; expressed in the sensory neurons ASE and PVM. | Paper_evidence | WBPaper00003889 | |||||
| WBPaper00004931 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in neuropeptide signaling pathway. Predicted to be located in extracellular region. Expressed in head; neurons; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03G5.7 | |||||||
| Corresponding_CDS_history | C03G5.7:wp236 | ||||||||
| Corresponding_transcript | C03G5.7.1 | ||||||||
| C03G5.7.2 | |||||||||
| Other_sequence | CJC04122_1 | ||||||||
| Oden_isotig25265 | |||||||||
| CRC08365_1 | |||||||||
| Hbac_isotig03961 | |||||||||
| CR05029 | |||||||||
| FD514102.1 | |||||||||
| CBC08035_1 | |||||||||
| CSC00783_1 | |||||||||
| Associated_feature | WBsf648371 | ||||||||
| WBsf1006180 | |||||||||
| WBsf1023429 | |||||||||
| WBsf236056 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010061 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001366 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039535 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (12) | |||||||||
| Drives_construct (6) | |||||||||
| Construct_product | WBCnstr00036939 | ||||||||
| Antibody | WBAntibody00000611 | ||||||||
| Microarray_results | SMD_C03G5.7 | ||||||||
| 180535_at | |||||||||
| A_12_P119395 | |||||||||
| A_12_P130221 | |||||||||
| Aff_C03G5.7 | |||||||||
| GPL13394_WBGene00001448 | |||||||||
| GPL13914_C03G5.7 | |||||||||
| GPL14144_C03G5.7_213-272_0.958_1_A | |||||||||
| GPL14144_C03G5.7_283-342_0.801_15_C | |||||||||
| GPL14144_C03G5.7_42-101_0.844_9_B | |||||||||
| GPL19516_CGZ0002182 | |||||||||
| GPL19516_CGZ0002183 | |||||||||
| GPL21109_C03G5.7.1 | |||||||||
| GPL3518_CE06760 | |||||||||
| GPL8304_CE_WBGene00001448_A | |||||||||
| GPL8304_CE_WBGene00001448_B | |||||||||
| GPL8673_C03G5_7P00025 | |||||||||
| GPL8673_C03G5_7P00051 | |||||||||
| GPL8673_C03G5_7P00280 | |||||||||
| GPL9450_C03G5.7 | |||||||||
| cea2.c.40981 | |||||||||
| Expression_cluster (285) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | X | Position | 0.097994 | Error | 0.001997 | |||
| Positive | Positive_clone | C03G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
