WormBase Tree Display for Gene: WBGene00001034
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| WBGene00001034 | SMap | S_parent | Sequence | R74 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dnj-16 | Person_evidence | WBPerson625 | |||||
| Sequence_name | R74.4 | ||||||||
| Molecular_name | R74.4a | ||||||||
| R74.4a.1 | |||||||||
| CE01057 | |||||||||
| R74.4b | |||||||||
| CE43575 | |||||||||
| R74.4b.1 | |||||||||
| Other_name | CELE_R74.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | dnj-16 | ||||||||
| DB_info | Database | AceView | gene | 3F281 | |||||
| WormQTL | gene | WBGene00001034 | |||||||
| WormFlux | gene | WBGene00001034 | |||||||
| NDB | locus_tag | CELE_R74.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001034|UniProtKB=C1P627 | |||||||
| family | PTHR44272 | ||||||||
| NCBI | gene | 175540 | |||||||
| RefSeq | protein | NM_001267961.2 | |||||||
| NM_001267962.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF316045 | |||||||
| TrEMBL | UniProtAcc | C1P627 | |||||||
| Q22028 | |||||||||
| UniProt_GCRP | UniProtAcc | C1P627 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dnj | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3865 | ||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00001019 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001022 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001031 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001038 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001040 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001042 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001044 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | This gene encodes a protein containing a DnaJ ('J') domain. | Paper_evidence | WBPaper00012768 | |||||
| WBPaper00012859 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABplapaaapa; ABprapaaapa; germ line; intestine; and neurons based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by nine chemicals including Zidovudine; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DnaJ domain and Chaperone J-domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R74.4a | |||||||
| R74.4b | |||||||||
| Corresponding_transcript | R74.4a.1 | ||||||||
| R74.4b.1 | |||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf645066 | ||||||||
| WBsf645067 | |||||||||
| WBsf645068 | |||||||||
| WBsf224691 | |||||||||
| WBsf224692 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00106331 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052050 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076624 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034977 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017918 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005040 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023360 | ||||||||
| Expr1030646 | |||||||||
| Expr1155685 | |||||||||
| Expr2010990 | |||||||||
| Expr2029228 | |||||||||
| Drives_construct | WBCnstr00037129 | ||||||||
| Construct_product | WBCnstr00037129 | ||||||||
| Microarray_results | SMD_R74.4 | ||||||||
| 174744_s_at | |||||||||
| 188517_at | |||||||||
| A_12_P100909 | |||||||||
| Aff_R74.4 | |||||||||
| GPL13394_WBGene00001034 | |||||||||
| GPL13914_R74.4 | |||||||||
| GPL14144_R74.4b_400-459_0.901_27_C | |||||||||
| GPL14144_R74.4b_661-720_0.922_13_B | |||||||||
| GPL14144_R74.4b_873-932_0.944_6_A | |||||||||
| GPL19516_CGZ0032447 | |||||||||
| GPL19516_CGZ0032448 | |||||||||
| GPL19516_CGZ0032449 | |||||||||
| GPL21109_R74.4a.1 | |||||||||
| GPL3518_CE01057 | |||||||||
| GPL8304_CE_WBGene00001034_A | |||||||||
| GPL8304_CE_WBGene00001034_B | |||||||||
| GPL8673_R74_4P00096 | |||||||||
| GPL8673_R74_4P00406 | |||||||||
| GPL8673_R74_4P00969 | |||||||||
| GPL9450_R74.4 | |||||||||
| cea2.p.71507 | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (24) | |||||||||
| Map_info (3) | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
