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WormBase Tree Display for Gene: WBGene00000515

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Name Class

WBGene00000515EvidencePaper_evidenceWBPaper00005916
SMapS_parentSequenceT27A10
IdentityVersion1
NameCGC_nameckc-1
Sequence_nameT27A10.3
Molecular_name (7)
Other_nameCELE_T27A10.3Accession_evidenceNDBBX284606
Public_nameckc-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classckc
Allele (33)
RNASeq_FPKM (74)
GO_annotation00076543
00076544
00076545
00076546
00076547
Ortholog (38)
ParalogWBGene00000509Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000510Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000511Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000512Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000513Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000514Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionckc-1 encodes a putative ethanolamine or choline kinase, with somewhatmore sequence similarity to ethanolamine kinases; CKC-1 is the sole memberof a 'C' group of choline/ethanolamine kinases.Paper_evidenceWBPaper00005916
Curator_confirmedWBPerson567
Date_last_updated11 Aug 2006 00:00:00
Automated_descriptionPredicted to enable ethanolamine kinase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to be located in cytoplasm. Is an ortholog of human ETNK2 (ethanolamine kinase 2).Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST27A10.3a
T27A10.3b
Corresponding_transcriptT27A10.3a.1
T27A10.3b.1
T27A10.3b.2
Other_sequence (26)
Associated_featureWBsf647956
WBsf662613
WBsf662614
WBsf1004668
WBsf1022637
WBsf235503
WBsf235504
WBsf235505
WBsf235506
WBsf235507
Experimental_infoRNAi_resultWBRNAi00054255Inferred_automaticallyRNAi_primary
WBRNAi00083993Inferred_automaticallyRNAi_primary
WBRNAi00019297Inferred_automaticallyRNAi_primary
WBRNAi00084001Inferred_automaticallyRNAi_primary
WBRNAi00036014Inferred_automaticallyRNAi_primary
WBRNAi00084003Inferred_automaticallyRNAi_primary
Expr_patternExpr1012898
Expr1030305
Expr1157802
Expr2010030
Expr2028271
Drives_constructWBCnstr00037483
Construct_productWBCnstr00037483
Microarray_resultsSMD_T27A10.3
189316_at
A_12_P110514
A_12_P115750
A_12_P155155
A_12_P155156
Aff_T27A10.3
GPL13394_WBGene00000515
GPL13914_T27A10.3
GPL14144_T27A10.3a_611-670_0.913_4_B
GPL14144_T27A10.3a_677-736_0.890_10_C
GPL14144_T27A10.3a_858-917_0.947_1_A
GPL19516_CGZ0037027
GPL19516_CGZ0037028
GPL21109_T27A10.3a
GPL21109_T27A10.3b
GPL3518_CE07553
GPL8304_CE_WBGene00000515_A
GPL8304_CE_WBGene00000515_B
GPL8304_CE_WBGene00000515_C
GPL8673_T27A10_3aP00018
GPL8673_T27A10_3aP00716
GPL8673_T27A10_3aP00942
GPL8673_T27A10_3bP00018
GPL8673_T27A10_3bP00716
GPL8673_T27A10_3bP00882
GPL9450_T27A10.3
cea2.c.48260
Expression_cluster (155)
Interaction (59)
Map_infoMapXPosition-10.0262
PositivePositive_cloneT27A10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005916
WBPaper00038491
WBPaper00042257
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene