WormBase Tree Display for Gene: WBGene00000399
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WBGene00000399 | SMap | S_parent | Sequence | R05H10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | cdh-7 | Person_evidence | WBPerson698 | |||||
Sequence_name | R05H10.6 | ||||||||
Molecular_name | R05H10.6 | ||||||||
R05H10.6.1 | |||||||||
CE38092 | |||||||||
Other_name | CELE_R05H10.6 | Accession_evidence | NDB | BX284602 | |||||
Public_name | cdh-7 | ||||||||
DB_info | Database | AceView | gene | 2P135 | |||||
WormQTL | gene | WBGene00000399 | |||||||
WormFlux | gene | WBGene00000399 | |||||||
NDB | locus_tag | CELE_R05H10.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000399|UniProtKB=O62328 | |||||||
family | PTHR24026 | ||||||||
NCBI | gene | 175143 | |||||||
RefSeq | protein | NM_064674.6 | |||||||
TrEMBL | UniProtAcc | O62328 | |||||||
UniProt_GCRP | UniProtAcc | O62328 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cdh | ||||||||
Allele (160) | |||||||||
Strain | WBStrain00031423 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00037710 | ||||||||
00037711 | |||||||||
00037712 | |||||||||
00107331 | |||||||||
00107332 | |||||||||
00107333 | |||||||||
00107334 | |||||||||
Ortholog (25) | |||||||||
Paralog (8) | |||||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result | WBRNAi00051339 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034638 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017475 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019067 | ||||||||
Expr1155032 | |||||||||
Expr2028044 | |||||||||
Drives_construct | WBCnstr00037569 | ||||||||
Construct_product | WBCnstr00037569 | ||||||||
Microarray_results | SMD_R05H10.6 | ||||||||
190177_at | |||||||||
A_12_P115537 | |||||||||
Aff_R05H10.6 | |||||||||
GPL13394_WBGene00000399 | |||||||||
GPL13914_R05H10.6 | |||||||||
GPL14144_R05H10.6_3013-3072_0.863_53_C | |||||||||
GPL14144_R05H10.6_3651-3710_0.938_7_A | |||||||||
GPL14144_R05H10.6_3977-4036_0.969_1_B | |||||||||
GPL19516_CGZ0031085 | |||||||||
GPL21109_R05H10.6 | |||||||||
GPL3518_CE18108 | |||||||||
GPL8304_CE_WBGene00000399_A | |||||||||
GPL8304_CE_WBGene00000399_B | |||||||||
GPL8673_R05H10_6P02642 | |||||||||
GPL8673_R05H10_6P03087 | |||||||||
GPL8673_R05H10_6P03705 | |||||||||
GPL9450_R05H10.6 | |||||||||
cea2.3.21236 | |||||||||
cea2.p.44171 | |||||||||
Expression_cluster (223) | |||||||||
Interaction (47) | |||||||||
Map_info | Map | II | Position | 23.6184 | Error | 0.024266 | |||
Positive | Positive_clone | R05H10 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4193 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004508 | ||||||||
WBPaper00013424 | |||||||||
WBPaper00018119 | |||||||||
WBPaper00032446 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00058555 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |