WormBase Tree Display for Gene: WBGene00016602
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| WBGene00016602 | SMap | S_parent | Sequence | C43E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mus-81 | Paper_evidence | WBPaper00028727 | |||||
| Sequence_name | C43E11.2 | ||||||||
| Molecular_name | C43E11.2a | ||||||||
| C43E11.2a.1 | |||||||||
| CE08680 | |||||||||
| C43E11.2b | |||||||||
| CE32609 | |||||||||
| C43E11.2b.1 | |||||||||
| C43E11.2b.2 | |||||||||
| C43E11.2b.3 | |||||||||
| Other_name | CELE_C43E11.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mus-81 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Dec 2006 12:29:53 | WBPerson1847 | Name_change | CGC_name | mus-81 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mus | ||||||||
| Allele (42) | |||||||||
| Strain | WBStrain00034679 | ||||||||
| WBStrain00034681 | |||||||||
| WBStrain00034682 | |||||||||
| WBStrain00034697 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (42) | |||||||||
| Contained_in_operon | CEOP1168 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00018923 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Enables enzyme binding activity. Involved in several processes, including DNA recombination; larval development; and positive regulation of embryonic development. Predicted to be located in nucleus. Predicted to be part of Holliday junction resolvase complex. Is an ortholog of human MUS81 (MUS81 structure-specific endonuclease subunit). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C43E11.2a | |||||||
| C43E11.2b | |||||||||
| Corresponding_transcript | C43E11.2a.1 | ||||||||
| C43E11.2b.1 | |||||||||
| C43E11.2b.2 | |||||||||
| C43E11.2b.3 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf217513 | ||||||||
| WBsf217514 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042381 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003140 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117051 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029759 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016841 | ||||||||
| Expr1037128 | |||||||||
| Expr1146370 | |||||||||
| Expr2013828 | |||||||||
| Expr2032068 | |||||||||
| Drives_construct | WBCnstr00027946 | ||||||||
| Construct_product | WBCnstr00027946 | ||||||||
| Microarray_results | SMD_C43E11.2 | ||||||||
| SMD_C43E11.9 | |||||||||
| 184653_at | |||||||||
| A_12_P102927 | |||||||||
| Aff_C43E11.2 | |||||||||
| GPL13394_WBGene00016602 | |||||||||
| GPL13914_C43E11.2 | |||||||||
| GPL14144_C43E11.2a_1201-1260_0.876_47_C | |||||||||
| GPL14144_C43E11.2a_819-878_0.938_4_B | |||||||||
| GPL14144_C43E11.2a_861-920_0.916_19_A | |||||||||
| GPL19516_CGZ0008664 | |||||||||
| GPL19516_CGZ0008665 | |||||||||
| GPL21109_C43E11.2a | |||||||||
| GPL3518_CE32609 | |||||||||
| GPL8304_CE_WBGene00016602_A | |||||||||
| GPL8304_CE_WBGene00016602_B | |||||||||
| GPL8673_C43E11_2aP00107 | |||||||||
| GPL8673_C43E11_2aP00421 | |||||||||
| GPL8673_C43E11_2aP00592 | |||||||||
| GPL8673_C43E11_2bP00018 | |||||||||
| GPL8673_C43E11_2bP00195 | |||||||||
| GPL8673_C43E11_2bP00340 | |||||||||
| GPL9450_C43E11.2a | |||||||||
| GPL9450_C43E11.2b | |||||||||
| cea2.d.01327 | |||||||||
| cea2.d.01330 | |||||||||
| Expression_cluster (108) | |||||||||
| SAGE_tag | SAGE:gttcgagggc | Strand | Antisense | ||||||
| SAGE:ggtctcgttaggaattt | Strand | Antisense | |||||||
| SAGE:gctaatcgaa | Strand | Antisense | |||||||
| SAGE:ggtctcgtta | Strand | Antisense | |||||||
| SAGE:gatggaaatcgatcggc | Strand | Antisense | |||||||
| SAGE:aataaaaaaa | Strand | Antisense | |||||||
| SAGE:gtatccctgc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gtatccctgctttcata | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (37) | |||||||||
| Map_info | Map | I | Position | -1.52341 | Error | 0.003125 | |||
| Positive | Positive_clone | C43E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00019734 | ||||||||
| WBPaper00028727 | |||||||||
| WBPaper00030838 | |||||||||
| WBPaper00031945 | |||||||||
| WBPaper00032410 | |||||||||
| WBPaper00035505 | |||||||||
| WBPaper00035885 | |||||||||
| WBPaper00035991 | |||||||||
| WBPaper00037751 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042804 | |||||||||
| WBPaper00043242 | |||||||||
| WBPaper00043946 | |||||||||
| WBPaper00043947 | |||||||||
| WBPaper00043987 | |||||||||
| WBPaper00045550 | |||||||||
| WBPaper00050185 | |||||||||
| WBPaper00053104 | |||||||||
| WBPaper00054686 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057760 | |||||||||
| WBPaper00061254 | |||||||||
| WBPaper00064114 | |||||||||
| WBPaper00064312 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
