WormBase Tree Display for Gene: WBGene00021466

WBGene00021466 SMap: S_parent: Sequence: Y39G10AR
  Identity: Version: 2
    Name: CGC_name: eif-2gamma Person_evidence: WBPerson2266
      Sequence_name: Y39G10AR.8
      Molecular_name: Y39G10AR.8
        Y39G10AR.8.1
        CE27254
      Other_name: CELE_Y39G10AR.8 Accession_evidence: NDB BX284601
      Public_name: eif-2gamma
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Jan 2017 15:00:31 WBPerson2970 Name_change: CGC_name: eif-2gamma
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eif
    Allele (39)
    Strain: WBStrain00001446
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (42)
    Paralog (17)
    Structured_description: Automated_description: Predicted to enable translation initiation factor activity. Predicted to contribute to tRNA binding activity. Predicted to be involved in formation of translation preinitiation complex. Predicted to be part of eukaryotic translation initiation factor 2 complex. Expressed in tail. Human ortholog(s) of this gene implicated in MEHMO syndrome. Is an ortholog of human EIF2S3 (eukaryotic translation initiation factor 2 subunit gamma) and EIF2S3B (eukaryotic translation initiation factor 2 subunit gamma B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0060801 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3267)
  Molecular_info: Corresponding_CDS: Y39G10AR.8
    Corresponding_transcript: Y39G10AR.8.1
    Other_sequence: HGC01386_1
      Oden_isotig02635
      HBC08363_1
      BUC01780_1
      CR06751
      EY468072.1
      MH04969
      MHC01406_1
      FC552736.1
      Hbac_isotig01206
      PP00804
      Tcol_isotig23112
      Oden_isotig02637
      TCC00427_1
      SC00481
      Oden_isotig02629
      GR13165
      SS02703
      Oden_isotig02628
      XI04304
      Acan_isotig08294
      SS03447
      ES744241.1
      FC552388.1
      Tcol_isotig06123
      FK802105.1
      JI168677.1
      GT737182.1
      BXC02505_1
      PPC04875_1
      SSC03691_1
      EX560606.1
      Oden_isotig02636
      BXC06787_1
      CJC07845_1
      BMC08683_1
      EX015138.1
      Tcol_isotig06121
      ES565115.1
      CR01214
      Oden_isotig02632
      TSC13311_1
      EY463132.1
      Oden_isotig02631
      SSC05403_1
      GRC02295_1
      EX500417.1
      BE761000.1
      Acan_isotig13039
      EX827808.1
      EX501309.1
      EX551849.1
      EX007461.1
      HG01804
      Name_isotig01538
      HCC00491_1
      EY463467.1
      JO474275.1
      PPC09863_1
      GR977851.1
      HBC26501_1
      Oden_isotig02633
      TX02006
      CRC09064_1
      Oden_isotig02639
      HC02838
      XIC04755_1
      EY468282.1
      Oden_isotig02630
      Oden_isotig02634
      ACC07591_1
      EX561868.1
      Tcol_isotig06122
      EX562254.1
      ACC06678_1
      Dviv_isotig24013
      JI173744.1
      CBC00711_1
      Oden_isotig02638
    Associated_feature: WBsf643091
      WBsf982847
      WBsf982848
      WBsf982849
      WBsf1009319
      WBsf217295
      WBsf217296
  Experimental_info: RNAi_result (34)
    Expr_pattern: Chronogram1037
      Expr6958
      Expr1029048
      Expr1039379
      Expr1159764
      Expr2011251
      Expr2029487
    Drives_construct: WBCnstr00002328
      WBCnstr00024543
    Construct_product: WBCnstr00024543
    Microarray_results: SMD_Y39G10A_246.C
      SMD_Y39G10A_246.H
      176446_s_at
      A_12_P104518
      Aff_Y39G10A_246.C
      GPL13394_WBGene00021466
      GPL13914_Y39G10AR.8
      GPL14144_Y39G10AR.8_1132-1191_0.943_2_B
      GPL14144_Y39G10AR.8_1147-1206_0.933_3_C
      GPL14144_Y39G10AR.8_1151-1210_0.950_1_A
      GPL19516_CGZ0045003
      GPL21109_Y39G10AR.8
      GPL3518_CE27254
      GPL8304_CE_WBGene00021466_A
      GPL8304_CE_WBGene00021466_B
      GPL8673_Y39G10AR_8P00258
      GPL8673_Y39G10AR_8P00720
      GPL8673_Y39G10AR_8P01313
      GPL9450_Y39G10AR.8
      cea2.p.20692
    Expression_cluster (126)
    Interaction (290)
  Map_info: Map: I Position: -9.39239
    Positive: Positive_clone: Y39G10AR Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027281
    WBPaper00029435
    WBPaper00038491
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene