WormBase Tree Display for Gene: WBGene00018005

WBGene00018005 SMap: S_parent: Sequence: F33D11
  Identity: Version: 2
    Name: CGC_name: nlp-62 Paper_evidence: WBPaper00053338
      Sequence_name: F33D11.8
      Molecular_name: F33D11.8
        F33D11.8.1
        CE29785
      Other_name: CELE_F33D11.8 Accession_evidence: NDB BX284601
      Public_name: nlp-62
    DB_info: Database: AceView gene 1G428
        WormQTL gene WBGene00018005
        WormFlux gene WBGene00018005
        NDB locus_tag CELE_F33D11.8
        NCBI gene 185230
        RefSeq protein NM_059298.6
        TrEMBL UniProtAcc O44779
        UniProt_GCRP UniProtAcc O44779
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 13 Nov 2017 15:54:28 WBPerson1983 Name_change: CGC_name: nlp-62
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nlp
    Allele (16)
    Strain: WBStrain00055104
    RNASeq_FPKM (74)
    GO_annotation: 00033402
      00033403
    Ortholog: WBGene00026769 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00078384 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00145282 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152793 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g9353 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4273 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2049 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3757 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11141 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22472 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8100 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21622 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8755 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17021 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-F33D11.8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17093 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_22733 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001029 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10294500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1013 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Involved in defense response to Gram-negative bacterium. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F33D11.8
    Corresponding_transcript: F33D11.8.1
    Associated_feature: WBsf649196
      WBsf983786
      WBsf1009873
      WBsf219493
      WBsf219494
  Experimental_info: RNAi_result: WBRNAi00003574 Inferred_automatically: RNAi_primary
      WBRNAi00046200 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029137
      Expr1150087
      Expr2003254
      Expr2021468
    Drives_construct: WBCnstr00026846
    Construct_product: WBCnstr00026846
    Microarray_results: SMD_F33D11.8
      172580_at
      A_12_P115883
      Aff_F33D11.8
      GPL13394_WBGene00018005
      GPL13914_F33D11.8
      GPL14144_F33D11.8_191-250_0.902_1_B
      GPL14144_F33D11.8_4-63_0.791_11_C
      GPL14144_F33D11.8_82-141_0.899_2_A
      GPL19516_CGZ0019446
      GPL21109_F33D11.8
      GPL3518_CE29785
      GPL8304_CE_WBGene00018005_A
      GPL8673_F33D11_8P00080
      GPL8673_F33D11_8P00084
      GPL8673_F33D11_8P00151
      GPL9450_F33D11.8
      cea2.c.03270
    Expression_cluster (139)
    Interaction (45)
  Map_info: Positive: Positive_clone: F33D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 0.47108
  Reference: WBPaper00050183
    WBPaper00065946
  Method: Gene