WormBase Tree Display for Gene: WBGene00015956

WBGene00015956 SMap: S_parent: Sequence: C18B2
  Identity: Version: 1
    Name: Sequence_name: C18B2.5
      Molecular_name: C18B2.5a
        C18B2.5a.1
        CE04044
        C18B2.5b
        CE30872
        C18B2.5b.1
      Other_name: CELE_C18B2.5 Accession_evidence: NDB BX284606
      Public_name: C18B2.5
    DB_info: Database: AceView gene XE226
        WormQTL gene WBGene00015956
        WormFlux gene WBGene00015956
        NDB locus_tag CELE_C18B2.5
        Panther gene CAEEL|WormBase=WBGene00015956|UniProtKB=H2KYV3
          family PTHR18884
        NCBI gene 180653
        RefSeq protein NM_171653.5
            NM_171945.8
        TREEFAM TREEFAM_ID TF317271
        TrEMBL UniProtAcc Q18076
            H2KYV3
        UniProt_GCRP UniProtAcc H2KYV3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (58)
    RNASeq_FPKM (74)
    GO_annotation: 00021909
      00021910
      00021911
      00021912
      00021913
      00021914
      00021915
      00021916
      00021917
    Ortholog: WBGene00051950 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034807 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154923 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126798 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00095216 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g2421 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2536 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18749 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10451 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g420 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1791 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g396 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13075 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20539 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22484 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00033.g1914 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C18B2.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18197 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00003.g176 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00802 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024132 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12892 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20198 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0267600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18782 Caenorhabditis elegans From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-030131-7225 Danio rerio From_analysis: OrthoFinder
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060531-98 Danio rerio From_analysis: OrthoFinder
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00006793 Caenorhabditis elegans From_analysis: Panther
      WBGene00006795 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in cytoskeleton-dependent cytokinesis and regulation of exocytosis. Predicted to be located in cell division site; cytoskeleton; and synaptic vesicle. Predicted to be part of septin complex. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C18B2.5a
      C18B2.5b
    Corresponding_transcript: C18B2.5a.1
      C18B2.5b.1
    Other_sequence (29)
    Associated_feature: WBsf653854
      WBsf670349
      WBsf1004675
      WBsf1004676
      WBsf1022643
      WBsf1022644
      WBsf237193
      WBsf237194
  Experimental_info: RNAi_result: WBRNAi00029058 Inferred_automatically: RNAi_primary
      WBRNAi00040909 Inferred_automatically: RNAi_primary
      WBRNAi00040908 Inferred_automatically: RNAi_primary
      WBRNAi00010986 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020984
      Expr1036821
      Expr1144954
      Expr2000964
      Expr2019185
    Drives_construct: WBCnstr00028426
    Construct_product: WBCnstr00028426
    Microarray_results: SMD_C18B2.5
      180040_s_at
      A_12_P102399
      A_12_P102829
      Aff_C18B2.5
      GPL13394_WBGene00015956
      GPL13914_C18B2.5
      GPL14144_C18B2.5b_1632-1691_0.922_31_B
      GPL14144_C18B2.5b_1817-1876_0.928_26_C
      GPL14144_C18B2.5b_1843-1902_0.953_4_A
      GPL19516_CGZ0005319
      GPL19516_CGZ0005320
      GPL21109_C18B2.5a
      GPL3518_CE04044
      GPL8304_CE_WBGene00015956_A
      GPL8673_C18B2_5aP00803
      GPL8673_C18B2_5aP00926
      GPL8673_C18B2_5aP01016
      GPL8673_C18B2_5bP00881
      GPL8673_C18B2_5bP01004
      GPL8673_C18B2_5bP01094
      GPL9450_C18B2.5a
      GPL9450_C18B2.5b
      cea2.d.00769
      cea2.d.13518
    Expression_cluster (198)
    Interaction (115)
  Map_info: Positive: Positive_clone: C18B2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -9.97883
  Reference: WBPaper00023305
  Method: Gene