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WormBase Tree Display for Gene: WBGene00011262

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Name Class

WBGene00011262SMapS_parentSequenceR13H4
IdentityVersion2
NameCGC_namepho-8Person_evidenceWBPerson411
WBPerson261
Sequence_nameR13H4.3
Molecular_nameR13H4.3
R13H4.3.1
CE43107
Other_nameCELE_R13H4.3Accession_evidenceNDBBX284605
Public_namepho-8
DB_infoDatabaseAceViewgene5M313
WormQTLgeneWBGene00011262
WormFluxgeneWBGene00011262
NDBlocus_tagCELE_R13H4.3
PanthergeneCAEEL|WormBase=WBGene00011262|UniProtKB=P90949
familyPTHR11567
NCBIgene179621
RefSeqproteinNM_073582.5
TrEMBLUniProtAccP90949
UniProt_GCRPUniProtAccP90949
OMIMgene606362
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
204 Nov 2008 10:21:23WBPerson2970Name_changeCGC_namepho-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpho
Allele (37)
RNASeq_FPKM (74)
GO_annotation (2)
OrthologWBGene00041639Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00052370Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00141545Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00127383Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00116105Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00227336Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g95Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2426Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10756Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11986Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g805Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3498Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4362Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1270Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11066Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4582Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14447Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-pho-8Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7787Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00021.g1274Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10681Caenorhabditis latensFrom_analysisWormBase-Compara
chrV_pilon.g15867Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00209913Caenorhabditis japonicaFrom_analysisWormBase-Compara
FB:FBgn0036875Drosophila melanogasterFrom_analysisOMA
OrthoInspector
Panther
FB:FBgn0036876Drosophila melanogasterFrom_analysisOMA
OrthoInspector
Panther
FB:FBgn0036877Drosophila melanogasterFrom_analysisOMA
OrthoInspector
Panther
FB:FBgn0000032Drosophila melanogasterFrom_analysisOMA
OrthoInspector
Panther
ZFIN:ZDB-GENE-050306-40Danio rerioFrom_analysisOrthoFinder
Panther
PhylomeDB
HGNC:123Homo sapiensFrom_analysisOMA
OrthoFinder
Panther
PhylomeDB
HGNC:14376Homo sapiensFrom_analysisOMA
OrthoFinder
Panther
PhylomeDB
MGI:87882Mus musculusFrom_analysisOMA
OrthoFinder
Panther
PhylomeDB
MGI:3644563Mus musculusFrom_analysisOMA
OrthoFinder
Panther
PhylomeDB
RGD:2023Rattus norvegicusFrom_analysisOMA
OrthoFinder
Panther
PhylomeDB
RGD:1308270Rattus norvegicusFrom_analysisOMA
OrthoFinder
Panther
PhylomeDB
Paralog (23)
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Predicted to be involved in dephosphorylation. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 1J. Is an ortholog of human ACP2 (acid phosphatase 2, lysosomal) and ACP4 (acid phosphatase 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080953Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:14376)
Molecular_infoCorresponding_CDSR13H4.3
Corresponding_CDS_historyR13H4.3:wp195
Corresponding_transcriptR13H4.3.1
Other_sequenceHGC07463_1
CRC08827_1
Oden_isotig14541
CJC18201_1
Oden_isotig14542
CR04016
HG07302
Experimental_infoRNAi_resultWBRNAi00051938Inferred_automaticallyRNAi_primary
WBRNAi00034929Inferred_automaticallyRNAi_primary
WBRNAi00017848Inferred_automaticallyRNAi_primary
WBRNAi00051939Inferred_automaticallyRNAi_primary
Expr_patternExpr1026966
Expr1155583
Expr2014911
Expr2033147
Microarray_resultsSMD_R13H4.3
190987_at
A_12_P109423
Aff_R13H4.3
GPL13394_WBGene00011262
GPL13914_R13H4.3
GPL14144_R13H4.3_1040-1099_0.915_8_C
GPL14144_R13H4.3_645-704_0.932_3_B
GPL14144_R13H4.3_904-963_0.946_1_A
GPL19516_CGZ0032187
GPL21109_R13H4.3
GPL3518_CE12804
GPL8304_CE_WBGene00011262_A
GPL8304_CE_WBGene00011262_B
GPL8673_R13H4_3P00082
GPL8673_R13H4_3P00465
GPL8673_R13H4_3P00993
GPL9450_R13H4.3
cea2.p.122633
Expression_cluster (240)
Interaction (11)
Map_infoMapVPosition3.40557Error0.003351
PositivePositive_cloneR13H4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00061938
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene