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WormBase Tree Display for Gene: WBGene00009285

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Name Class

WBGene00009285SMapS_parentSequenceF31C3
IdentityVersion3
NameCGC_namebltp-2Person_evidenceWBPerson30888
Sequence_nameF31C3.3
Molecular_nameF31C3.3
F31C3.3.1
CE42847
Other_namefmp-27Person_evidenceWBPerson30888
CELE_F31C3.3Accession_evidenceNDBBX284601
Public_namebltp-2
DB_infoDatabaseAceViewgene1P634
WormQTLgeneWBGene00009285
WormFluxgeneWBGene00009285
NDBlocus_tagCELE_F31C3.3
PanthergeneCAEEL|WormBase=WBGene00009285|UniProtKB=O62191
familyPTHR15678
NCBIgene173375
RefSeqproteinNM_061224.9
TREEFAMTREEFAM_IDTF314307
TrEMBLUniProtAccO62191
UniProt_GCRPUniProtAccO62191
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
205 May 2023 12:43:54WBPerson51134Name_changeCGC_namefmp-27
326 Jan 2024 23:28:21WBPerson51134Name_changeCGC_namebltp-2
Other_namefmp-27
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbltp
Allele (152)
StrainWBStrain00002607
In_clusterconserved_miRNA_siRNA_cluster
RNASeq_FPKM (74)
Contained_in_operonCEOP1776
OrthologWBGene00038907Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00060881Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00154237Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00121243Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00110484Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00232229Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10382Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3831Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g455Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8309Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13437Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22989Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1812Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g1814Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7622Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7115Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10749Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00119.g4890Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F31C3.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g3816Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18987Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03333.g29843Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_09917.g39745Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09145Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001465Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g6264Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10011200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g3009Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129301Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00244176Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261692Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287820Trichuris murisFrom_analysisWormBase-Compara
SGD:S000004446Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
SGD:S000006321Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0035420Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-8118Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:28960Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1919753Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1307929Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionEnriched in body wall musculature; germ line; somatic nervous system; and vulval muscle based on Chronogram; RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on RNA-seq and microarray studies. Is affected by seven chemicals including rotenone; Alovudine; and silicon dioxide nanoparticle based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Hobbit; BLTP2, sixth RBG module; BLTP2/FMP27/Hobbit, C-terminal; Fmp27/BLTP2/Hobbit, GFWDK motif-containg RBG unit; Phosphorylation site; and FMP27/BLTP2/Hobbit, GFWDK motif-containing RBG unit. Is an ortholog of human BLTP2 (bridge-like lipid transfer protein family member 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF31C3.3
Corresponding_CDS_historyF31C3.3:wp90
F31C3.3:wp152
F31C3.3:wp193
Corresponding_transcriptF31C3.3.1
Other_sequence (38)
Associated_featureWBsf665196
WBsf665197
WBsf665198
WBsf665199
WBsf665200
WBsf220687
Experimental_infoRNAi_resultWBRNAi00003546Inferred_automaticallyRNAi_primary
WBRNAi00116527Inferred_automaticallyRNAi_primary
WBRNAi00045995Inferred_automaticallyRNAi_primary
Expr_patternChronogram1855
Expr5923
Expr1028660
Expr1034052
Expr1149894
Expr2003172
Expr2021385
Drives_constructWBCnstr00003165
WBCnstr00032313
Construct_productWBCnstr00032313
Microarray_resultsSMD_F31C3.1
SMD_F31C3.3
174199_at
177790_at
A_12_P101568
Aff_F31C3.3
GPL13394_WBGene00009285
GPL13914_F31C3.3
GPL14144_F31C3.3_5765-5824_0.922_6_B
GPL14144_F31C3.3_6152-6211_0.947_1_A
GPL14144_F31C3.3_6233-6292_0.922_5_C
GPL19516_CGZ0019061
GPL21109_F31C3.17
GPL21109_F31C3.3
GPL3518_CE32399
GPL8304_CE_WBGene00009285_A
GPL8673_F31C3_3P05099
GPL8673_F31C3_3P05366
GPL8673_F31C3_3P05633
GPL9450_F31C3.3
cea2.p.09090
Expression_cluster (131)
Interaction (11)
Map_infoPositivePositive_cloneF31C3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI29.8083
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064339
MethodGene