WormBase Tree Display for Gene: WBGene00009608
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WBGene00009608 | SMap | S_parent | Sequence | F41D3 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nhr-265 | Person_evidence | WBPerson600 | |||
Sequence_name | F41D3.3 | ||||||
Molecular_name | F41D3.3 | ||||||
F41D3.3.1 | |||||||
CE16022 | |||||||
Other_name | CELE_F41D3.3 | Accession_evidence | NDB | BX284601 | |||
Public_name | nhr-265 | ||||||
DB_info | Database | AceView | gene | 1M841 | |||
WormQTL | gene | WBGene00009608 | |||||
WormFlux | gene | WBGene00009608 | |||||
NDB | locus_tag | CELE_F41D3.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009608|UniProtKB=O45507 | |||||
family | PTHR46397 | ||||||
NCBI | gene | 185603 | |||||
RefSeq | protein | NM_060691.2 | |||||
TREEFAM | TREEFAM_ID | TF321941 | |||||
TrEMBL | UniProtAcc | O45507 | |||||
UniProt_GCRP | UniProtAcc | O45507 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (45) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00034659 | ||||||
00034660 | |||||||
00034661 | |||||||
00034662 | |||||||
00117245 | |||||||
00117246 | |||||||
00117247 | |||||||
00117248 | |||||||
Ortholog (19) | |||||||
Paralog (225) | |||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F41D3.3 | |||||
Corresponding_transcript | F41D3.3.1 | ||||||
Transcription_factor | WBTranscriptionFactor000531 | ||||||
Experimental_info | RNAi_result | WBRNAi00092055 | Inferred_automatically | RNAi_primary | |||
WBRNAi00003651 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046976 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113952 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1013200 | ||||||
Expr1150838 | |||||||
Expr2014156 | |||||||
Expr2032400 | |||||||
Drives_construct | WBCnstr00032061 | ||||||
Construct_product | WBCnstr00032061 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (75) | |||||||
Interaction (33) | |||||||
Map_info | Map | I | Position | 13.0994 | Error | 0.003721 | |
Positive | Positive_clone | F41D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5408 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |