WormBase Tree Display for Gene: WBGene00007704
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WBGene00007704 | SMap | S_parent | Sequence | C24H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mdt-21 | |||||||
Sequence_name | C24H11.9 | ||||||||
Molecular_name | C24H11.9 | ||||||||
C24H11.9.1 | |||||||||
CE36687 | |||||||||
Other_name | CeSrb7 | ||||||||
CELE_C24H11.9 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | mdt-21 | ||||||||
DB_info | Database | AceView | gene | 3M869 | |||||
WormQTL | gene | WBGene00007704 | |||||||
WormFlux | gene | WBGene00007704 | |||||||
NDB | locus_tag | CELE_C24H11.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007704|UniProtKB=Q6BER6 | |||||||
family | PTHR13381 | ||||||||
NCBI | gene | 3565572 | |||||||
RefSeq | protein | NM_001026013.3 | |||||||
SwissProt | UniProtAcc | Q6BER6 | |||||||
UniProt_GCRP | UniProtAcc | Q6BER6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Split_from | WBGene00007021 | ||
2 | 21 Jul 2006 11:25:26 | WBPerson2970 | Name_change | CGC_name | mdt-21 | ||||
Other_name | CeSrb7 | ||||||||
Split_from | WBGene00007021 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mdt | ||||||||
Allele (53) | |||||||||
Strain | WBStrain00052123 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00081895 | ||||||||
00081896 | |||||||||
00081897 | |||||||||
00081898 | |||||||||
00081899 | |||||||||
00081900 | |||||||||
00081901 | |||||||||
00115783 | |||||||||
Contained_in_operon | CEOP3831 | ||||||||
Ortholog (29) | |||||||||
Structured_description | Automated_description | Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Is an ortholog of human MED21 (mediator complex subunit 21). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C24H11.9 | |||||||
Corresponding_transcript | C24H11.9.1 | ||||||||
Other_sequence (17) | |||||||||
Associated_feature | WBsf994487 | ||||||||
WBsf225857 | |||||||||
WBsf225858 | |||||||||
Experimental_info | RNAi_result | WBRNAi00011129 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085246 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041121 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008431 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00066087 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112428 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006728 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019302 | ||||||||
Expr1033333 | |||||||||
Expr1145157 | |||||||||
Expr2013476 | |||||||||
Expr2031710 | |||||||||
Antibody | WBAntibody00001836 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (44) | |||||||||
Interaction | WBInteraction000556035 | ||||||||
WBInteraction000556842 | |||||||||
WBInteraction000561233 | |||||||||
Map_info | Map | III | Position | 12.675 | Error | 0.134874 | |||
Positive | Positive_clone | C24H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00003858 | ||||||||
WBPaper00006530 | |||||||||
WBPaper00028984 | |||||||||
WBPaper00029038 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065308 | |||||||||
Remark | mdt-21 was improperly linked to C24H11.6. C24H11.6 is now split into C24H11.6 and C24H11.9 based on C. briggsae and human homologies. C24H11.6 corresponds to the 5' end and C24H11.9 corresponds to the 3' end and MDT-21 homologue | Curator_confirmed | WBPerson1983 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |