WormBase Tree Display for Gene: WBGene00009865
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WBGene00009865 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F49B2.6 | |||||||
Molecular_name | F49B2.6 | ||||||||
F49B2.6.1 | |||||||||
CE40456 | |||||||||
Other_name | Y105E8A.a | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_F49B2.6 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | F49B2.6 | ||||||||
DB_info | Database | AceView | gene | 1O931 | |||||
WormQTL | gene | WBGene00009865 | |||||||
WormFlux | gene | WBGene00009865 | |||||||
NDB | locus_tag | CELE_F49B2.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009865|UniProtKB=G5EGH4 | |||||||
family | PTHR11533 | ||||||||
NCBI | gene | 173297 | |||||||
RefSeq | protein | NM_061102.5 | |||||||
TrEMBL | UniProtAcc | G5EGH4 | |||||||
UniProt_GCRP | UniProtAcc | G5EGH4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (210) | |||||||||
Strain | WBStrain00055195 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (64) | |||||||||
Paralog (13) | |||||||||
Structured_description | Automated_description | Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Predicted to be involved in peptide catabolic process and proteolysis. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including severe acute respiratory syndrome; severe pre-eclampsia; and uterine disease (multiple). Is an ortholog of human ERAP1 (endoplasmic reticulum aminopeptidase 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:2871 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18173) | ||||
DOID:2945 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:500) | ||||||
DOID:2893 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18173) | ||||||
DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6656) | ||||||
DOID:13129 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18173,HGNC:29499,HGNC:6656) | ||||||
DOID:127 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6656) | ||||||
DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6656) | ||||||
DOID:8488 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6656) | ||||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6656) | ||||||
Molecular_info | Corresponding_CDS | F49B2.6 | |||||||
Corresponding_CDS_history | F49B2.6:wp165 | ||||||||
Corresponding_transcript | F49B2.6.1 | ||||||||
Other_sequence | RSC03442_1 | ||||||||
ACC27304_1 | |||||||||
Oden_isotig21442 | |||||||||
Dviv_isotig05052 | |||||||||
JI166885.1 | |||||||||
Dviv_isotig05053 | |||||||||
JO471077.1 | |||||||||
RS09292 | |||||||||
Associated_feature (15) | |||||||||
Experimental_info | RNAi_result | WBRNAi00047794 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003723 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026540 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026541 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004468 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028980 | ||||||||
Expr1151628 | |||||||||
Expr2003904 | |||||||||
Expr2022126 | |||||||||
Microarray_results | SMD_F49B2.6 | ||||||||
SMD_Y105E8A.A | |||||||||
179357_at | |||||||||
185181_at | |||||||||
A_12_P107138 | |||||||||
A_12_P132340 | |||||||||
A_12_P132341 | |||||||||
Aff_F49B2.6 | |||||||||
Aff_Y105E8A.A | |||||||||
GPL13394_WBGene00009865 | |||||||||
GPL13914_F49B2.6 | |||||||||
GPL14144_F49B2.6_2646-2705_0.925_8_C | |||||||||
GPL14144_F49B2.6_2800-2859_0.926_7_B | |||||||||
GPL14144_F49B2.6_3178-3237_0.971_1_A | |||||||||
GPL19516_CGZ0011450 | |||||||||
GPL19516_CGZ0022650 | |||||||||
GPL21109_Cat_F49B2.6 | |||||||||
GPL21109_F49B2.6 | |||||||||
GPL3518_CE16077 | |||||||||
GPL8304_CE_WBGene00009865_A | |||||||||
GPL8304_CE_WBGene00009865_B | |||||||||
GPL8673_F49B2_6P01915 | |||||||||
GPL8673_F49B2_6P02468 | |||||||||
GPL8673_F49B2_6P02956 | |||||||||
GPL9450_F49B2.6 | |||||||||
cea2.i.02872 | |||||||||
Expression_cluster (131) | |||||||||
Interaction | WBInteraction000460229 | ||||||||
Map_info | Positive | Positive_clone | F49B2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | 24.4129 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |