WormBase Tree Display for Gene: WBGene00020607

WBGene00020607 SMap: S_parent: Sequence: T20D4
  Identity: Version: 2
    Name: CGC_name: srab-20 Person_evidence: WBPerson1482
      Sequence_name: T20D4.1
      Molecular_name: T20D4.1
        T20D4.1.1
        CE36507
      Other_name: CELE_T20D4.1 Accession_evidence: NDB BX284605
      Public_name: srab-20
    DB_info: Database: AceView gene 5D899
        WormQTL gene WBGene00020607
        WormFlux gene WBGene00020607
        NDB locus_tag CELE_T20D4.1
        Panther gene CAEEL|WormBase=WBGene00020607|UniProtKB=P91475
          family PTHR46561
        NCBI gene 188637
        RefSeq protein NM_071560.3
        TREEFAM TREEFAM_ID TF315769
        TrEMBL UniProtAcc P91475
        UniProt_GCRP UniProtAcc P91475
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 06 Jan 2005 11:57:14 WBPerson2970 Name_change: CGC_name: srab-20
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srab
    Allele (118)
    Strain: WBStrain00002000
      WBStrain00002001
      WBStrain00002051
    RNASeq_FPKM (74)
    GO_annotation: 00051133
    Ortholog: WBGene00140473 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00211700 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00057874 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00115698 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00115695 Pristionchus pacificus From_analysis: Inparanoid_8
      chrV_pilon.g13744 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrV_pilon.g13746 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (42)
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in ganglia and head mesodermal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T20D4.1
    Corresponding_CDS_history: T20D4.1:wp120
    Corresponding_transcript: T20D4.1.1
  Experimental_info: RNAi_result: WBRNAi00018907 Inferred_automatically: RNAi_primary
      WBRNAi00053619 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3131
      Expr6718
      Expr6719
      Expr6720
      Expr14017
      Expr15413
      Expr1013351
      Expr1157176
    Drives_construct: WBCnstr00002784
      WBCnstr00002785
      WBCnstr00002835
      WBCnstr00011159
      WBCnstr00025011
    Construct_product: WBCnstr00025011
    Microarray_results (15)
    Expression_cluster (32)
    Interaction: WBInteraction000124589
      WBInteraction000137291
      WBInteraction000146931
      WBInteraction000168548
      WBInteraction000170386
      WBInteraction000183689
      WBInteraction000186111
      WBInteraction000187722
      WBInteraction000199262
      WBInteraction000205961
      WBInteraction000207935
      WBInteraction000212151
      WBInteraction000212966
      WBInteraction000215062
      WBInteraction000221591
      WBInteraction000224611
      WBInteraction000225050
      WBInteraction000227841
      WBInteraction000228960
      WBInteraction000228966
      WBInteraction000230592
      WBInteraction000236200
      WBInteraction000240996
      WBInteraction000246487
      WBInteraction000246604
      WBInteraction000248680
      WBInteraction000258504
      WBInteraction000259595
      WBInteraction000262420
      WBInteraction000268134
      WBInteraction000270652
      WBInteraction000271696
      WBInteraction000271924
      WBInteraction000273575
      WBInteraction000273712
      WBInteraction000275400
      WBInteraction000278081
      WBInteraction000282596
      WBInteraction000283473
      WBInteraction000283568
      WBInteraction000287385
      WBInteraction000293983
      WBInteraction000295977
      WBInteraction000296435
      WBInteraction000296769
      WBInteraction000297162
      WBInteraction000301181
      WBInteraction000302381
      WBInteraction000308788
      WBInteraction000309338
      WBInteraction000309412
      WBInteraction000316735
      WBInteraction000317687
      WBInteraction000320652
      WBInteraction000323106
      WBInteraction000323789
      WBInteraction000326007
      WBInteraction000330048
      WBInteraction000334381
      WBInteraction000334436
      WBInteraction000334557
      WBInteraction000334571
      WBInteraction000337547
      WBInteraction000353407
      WBInteraction000353685
      WBInteraction000353819
      WBInteraction000357553
      WBInteraction000358355
      WBInteraction000359546
      WBInteraction000364640
      WBInteraction000367467
      WBInteraction000370787
      WBInteraction000371619
      WBInteraction000376239
      WBInteraction000378409
      WBInteraction000378519
      WBInteraction000378769
      WBInteraction000380238
      WBInteraction000380898
      WBInteraction000382869
      WBInteraction000385034
      WBInteraction000385163
      WBInteraction000391763
      WBInteraction000397786
      WBInteraction000399678
      WBInteraction000405908
      WBInteraction000406895
      WBInteraction000413875
      WBInteraction000414093
      WBInteraction000419504
      WBInteraction000419534
      WBInteraction000428804
      WBInteraction000430771
      WBInteraction000431128
      WBInteraction000433068
      WBInteraction000434594
      WBInteraction000444306
      WBInteraction000444635
      WBInteraction000451508
  Map_info: Map: V Position: -11.6993 Error: 0.010599
    Positive: Positive_clone: T20D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024667
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene