WormBase Tree Display for Gene: WBGene00020250
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| WBGene00020250 | SMap | S_parent | Sequence | T05C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05C1.3 | |||||||
| Molecular_name | T05C1.3 | ||||||||
| T05C1.3.1 | |||||||||
| CE02861 | |||||||||
| Other_name | CELE_T05C1.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T05C1.3 | ||||||||
| DB_info | Database | AceView | gene | 2E776 | |||||
| WormQTL | gene | WBGene00020250 | |||||||
| WormFlux | gene | WBGene00020250 | |||||||
| NDB | locus_tag | CELE_T05C1.3 | |||||||
| NCBI | gene | 188114 | |||||||
| RefSeq | protein | NM_062392.2 | |||||||
| TREEFAM | TREEFAM_ID | TF321478 | |||||||
| TrEMBL | UniProtAcc | Q22219 | |||||||
| UniProt_GCRP | UniProtAcc | Q22219 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including NSM; PLM; amphid sheath cell; germline precursor cell; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and rrf-3 based on tiling array; RNA-seq; and microarray studies. Is affected by sixteen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05C1.3 | |||||||
| Corresponding_transcript | T05C1.3.1 | ||||||||
| Other_sequence | HBC13084_1 | ||||||||
| FG979651.1 | |||||||||
| Oden_isotig22139 | |||||||||
| MC01232 | |||||||||
| Associated_feature | WBsf979059 | ||||||||
| WBsf222921 | |||||||||
| WBsf222922 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052483 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035187 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012901 | ||||||||
| Expr1156108 | |||||||||
| Expr2005865 | |||||||||
| Expr2024082 | |||||||||
| Drives_construct | WBCnstr00025266 | ||||||||
| Construct_product | WBCnstr00025266 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction | WBInteraction000133909 | ||||||||
| WBInteraction000148798 | |||||||||
| WBInteraction000148944 | |||||||||
| WBInteraction000156667 | |||||||||
| WBInteraction000171546 | |||||||||
| WBInteraction000171722 | |||||||||
| WBInteraction000192070 | |||||||||
| WBInteraction000195301 | |||||||||
| WBInteraction000210164 | |||||||||
| WBInteraction000210829 | |||||||||
| WBInteraction000210858 | |||||||||
| WBInteraction000216756 | |||||||||
| WBInteraction000231501 | |||||||||
| WBInteraction000234877 | |||||||||
| WBInteraction000244388 | |||||||||
| WBInteraction000246353 | |||||||||
| WBInteraction000253812 | |||||||||
| WBInteraction000281467 | |||||||||
| WBInteraction000286583 | |||||||||
| WBInteraction000288649 | |||||||||
| WBInteraction000292747 | |||||||||
| WBInteraction000294004 | |||||||||
| WBInteraction000300949 | |||||||||
| WBInteraction000320847 | |||||||||
| WBInteraction000328087 | |||||||||
| WBInteraction000330352 | |||||||||
| WBInteraction000340397 | |||||||||
| WBInteraction000343278 | |||||||||
| WBInteraction000343579 | |||||||||
| WBInteraction000343814 | |||||||||
| WBInteraction000346826 | |||||||||
| WBInteraction000356453 | |||||||||
| WBInteraction000361933 | |||||||||
| WBInteraction000373079 | |||||||||
| WBInteraction000391442 | |||||||||
| WBInteraction000392383 | |||||||||
| WBInteraction000399220 | |||||||||
| WBInteraction000407419 | |||||||||
| WBInteraction000414599 | |||||||||
| WBInteraction000416202 | |||||||||
| WBInteraction000425247 | |||||||||
| WBInteraction000445361 | |||||||||
| WBInteraction000453096 | |||||||||
| WBInteraction000456014 | |||||||||
| WBInteraction000461499 | |||||||||
| Map_info | Positive | Positive_clone | T05C1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -4.32366 | |||||||
| Method | Gene |
