WormBase Tree Display for Gene: WBGene00019986
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| WBGene00019986 | SMap | S_parent | Sequence | R09F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R09F10.1 | |||||||
| Molecular_name | R09F10.1 | ||||||||
| R09F10.1.1 | |||||||||
| CE28755 | |||||||||
| Other_name | CELE_R09F10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R09F10.1 | ||||||||
| DB_info | Database | AceView | gene | XI943 | |||||
| WormQTL | gene | WBGene00019986 | |||||||
| WormFlux | gene | WBGene00019986 | |||||||
| NDB | locus_tag | CELE_R09F10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019986|UniProtKB=Q23030 | |||||||
| family | PTHR12411 | ||||||||
| NCBI | gene | 181087 | |||||||
| RefSeq | protein | NM_077007.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318600 | |||||||
| TrEMBL | UniProtAcc | Q23030 | |||||||
| UniProt_GCRP | UniProtAcc | Q23030 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (36) | |||||||||
| Strain | WBStrain00032974 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00077054 | ||||||||
| 00077055 | |||||||||
| 00077056 | |||||||||
| 00077057 | |||||||||
| 00077058 | |||||||||
| 00077059 | |||||||||
| 00077060 | |||||||||
| 00077061 | |||||||||
| 00124715 | |||||||||
| 00124716 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (28) | |||||||||
| Structured_description | Automated_description | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be located in extracellular space. Is an ortholog of human CTSW (cathepsin W). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R09F10.1 | |||||||
| Corresponding_transcript | R09F10.1.1 | ||||||||
| Other_sequence (111) | |||||||||
| Associated_feature | WBsf648357 | ||||||||
| WBsf236043 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017659 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115186 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089132 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076607 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034787 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051634 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012128 | ||||||||
| Expr1038678 | |||||||||
| Expr1155306 | |||||||||
| Expr2005519 | |||||||||
| Expr2023738 | |||||||||
| Drives_construct | WBCnstr00025447 | ||||||||
| Construct_product | WBCnstr00025447 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction | WBInteraction000226414 | ||||||||
| WBInteraction000235628 | |||||||||
| WBInteraction000278764 | |||||||||
| WBInteraction000299494 | |||||||||
| WBInteraction000320703 | |||||||||
| WBInteraction000328601 | |||||||||
| WBInteraction000332173 | |||||||||
| WBInteraction000345400 | |||||||||
| WBInteraction000350882 | |||||||||
| WBInteraction000353024 | |||||||||
| WBInteraction000360027 | |||||||||
| WBInteraction000361899 | |||||||||
| WBInteraction000371816 | |||||||||
| WBInteraction000378580 | |||||||||
| WBInteraction000386645 | |||||||||
| WBInteraction000389358 | |||||||||
| WBInteraction000394220 | |||||||||
| WBInteraction000394680 | |||||||||
| WBInteraction000401051 | |||||||||
| WBInteraction000408101 | |||||||||
| WBInteraction000410117 | |||||||||
| WBInteraction000411466 | |||||||||
| WBInteraction000412863 | |||||||||
| WBInteraction000421409 | |||||||||
| WBInteraction000421615 | |||||||||
| WBInteraction000423188 | |||||||||
| WBInteraction000426392 | |||||||||
| WBInteraction000430168 | |||||||||
| WBInteraction000441851 | |||||||||
| WBInteraction000448339 | |||||||||
| WBInteraction000450093 | |||||||||
| WBInteraction000575664 | |||||||||
| WBInteraction000581137 | |||||||||
| Map_info | Positive | Positive_clone | R09F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.160886 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
