WormBase Tree Display for Gene: WBGene00019723
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| WBGene00019723 | SMap | S_parent | Sequence | M02B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-47 | Person_evidence | WBPerson655 | |||||
| Sequence_name | M02B7.1 | ||||||||
| Molecular_name | M02B7.1 | ||||||||
| M02B7.1.1 | |||||||||
| CE12320 | |||||||||
| Other_name | CELE_M02B7.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | fbxc-47 | ||||||||
| DB_info | Database | AceView | gene | 4E571 | |||||
| WormQTL | gene | WBGene00019723 | |||||||
| WormFlux | gene | WBGene00019723 | |||||||
| NDB | locus_tag | CELE_M02B7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019723|UniProtKB=Q94286 | |||||||
| family | PTHR31379 | ||||||||
| NCBI | gene | 187396 | |||||||
| RefSeq | protein | NM_068018.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322125 | |||||||
| TrEMBL | UniProtAcc | Q94286 | |||||||
| UniProt_GCRP | UniProtAcc | Q94286 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-47 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele | WBVar01499633 | ||||||||
| WBVar00900896 | |||||||||
| WBVar00900897 | |||||||||
| WBVar00900898 | |||||||||
| WBVar00900899 | |||||||||
| WBVar00187911 | |||||||||
| WBVar00422010 | |||||||||
| WBVar00422011 | |||||||||
| WBVar01727194 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4108 | ||||||||
| Ortholog | chrIV_pilon.g10041 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (32) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaapa; ABprpaaapa; and germ line based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including hsf-1; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by six chemicals including hydrogen sulfide; Sirolimus; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Protein of unknown function DUF3557. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M02B7.1 | |||||||
| Corresponding_transcript | M02B7.1.1 | ||||||||
| Associated_feature | WBsf645887 | ||||||||
| WBsf660045 | |||||||||
| WBsf228127 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061856 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050808 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017117 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034376 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024438 | ||||||||
| Expr1038525 | |||||||||
| Expr1154499 | |||||||||
| Expr2011730 | |||||||||
| Expr2029969 | |||||||||
| Drives_construct | WBCnstr00025648 | ||||||||
| Construct_product | WBCnstr00025648 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction | WBInteraction000126669 | ||||||||
| WBInteraction000161519 | |||||||||
| WBInteraction000168972 | |||||||||
| WBInteraction000178371 | |||||||||
| WBInteraction000203082 | |||||||||
| WBInteraction000221635 | |||||||||
| WBInteraction000244190 | |||||||||
| WBInteraction000252038 | |||||||||
| WBInteraction000252636 | |||||||||
| WBInteraction000253302 | |||||||||
| WBInteraction000258948 | |||||||||
| WBInteraction000264973 | |||||||||
| WBInteraction000267869 | |||||||||
| WBInteraction000271168 | |||||||||
| WBInteraction000276400 | |||||||||
| WBInteraction000277585 | |||||||||
| WBInteraction000288496 | |||||||||
| WBInteraction000310099 | |||||||||
| WBInteraction000311725 | |||||||||
| WBInteraction000315827 | |||||||||
| WBInteraction000316120 | |||||||||
| WBInteraction000324163 | |||||||||
| WBInteraction000324955 | |||||||||
| WBInteraction000327098 | |||||||||
| WBInteraction000328066 | |||||||||
| WBInteraction000331846 | |||||||||
| WBInteraction000339955 | |||||||||
| WBInteraction000340611 | |||||||||
| WBInteraction000342870 | |||||||||
| WBInteraction000343960 | |||||||||
| WBInteraction000348819 | |||||||||
| WBInteraction000351810 | |||||||||
| WBInteraction000353952 | |||||||||
| WBInteraction000354250 | |||||||||
| WBInteraction000360016 | |||||||||
| WBInteraction000378894 | |||||||||
| WBInteraction000379109 | |||||||||
| WBInteraction000396416 | |||||||||
| WBInteraction000397368 | |||||||||
| WBInteraction000401208 | |||||||||
| WBInteraction000401343 | |||||||||
| WBInteraction000401876 | |||||||||
| WBInteraction000401896 | |||||||||
| WBInteraction000409370 | |||||||||
| WBInteraction000412506 | |||||||||
| WBInteraction000415496 | |||||||||
| WBInteraction000418286 | |||||||||
| WBInteraction000419513 | |||||||||
| WBInteraction000420343 | |||||||||
| WBInteraction000422450 | |||||||||
| WBInteraction000422807 | |||||||||
| WBInteraction000422976 | |||||||||
| WBInteraction000425176 | |||||||||
| WBInteraction000426443 | |||||||||
| WBInteraction000445162 | |||||||||
| WBInteraction000446636 | |||||||||
| WBInteraction000449908 | |||||||||
| WBInteraction000451593 | |||||||||
| WBInteraction000452300 | |||||||||
| WBInteraction000452562 | |||||||||
| WBInteraction000455141 | |||||||||
| WBInteraction000460478 | |||||||||
| Map_info | Map | IV | Position | -2.16488 | Error | 0.010236 | |||
| Positive | Positive_clone | M02B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
