WormBase Tree Display for Gene: WBGene00018240
expand all nodes | collapse all nodes | view schema
| WBGene00018240 | SMap | S_parent | Sequence | F40G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cox-17 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F40G9.2 | ||||||||
| Molecular_name | F40G9.2 | ||||||||
| F40G9.2.1 | |||||||||
| CE19849 | |||||||||
| Other_name | CELE_F40G9.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cox-17 | ||||||||
| DB_info | Database | AceView | gene | 3A809 | |||||
| WormQTL | gene | WBGene00018240 | |||||||
| WormFlux | gene | WBGene00018240 | |||||||
| NDB | locus_tag | CELE_F40G9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018240|UniProtKB=Q9TZ68 | |||||||
| family | PTHR16719 | ||||||||
| NCBI | gene | 175186 | |||||||
| RefSeq | protein | NM_064774.5 | |||||||
| TREEFAM | TREEFAM_ID | TF105074 | |||||||
| TrEMBL | UniProtAcc | Q9TZ68 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ68 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | cox-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cox | ||||||||
| Allele (36) | |||||||||
| Strain (2) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097839 | ||||||||
| 00097840 | |||||||||
| 00097841 | |||||||||
| 00097842 | |||||||||
| 00097843 | |||||||||
| 00123424 | |||||||||
| 00123425 | |||||||||
| 00123426 | |||||||||
| Contained_in_operon | CEOP3016 | ||||||||
| Ortholog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable copper chaperone activity. Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Predicted to be located in mitochondrial intermembrane space. Is an ortholog of human COX17 (cytochrome c oxidase copper chaperone COX17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40G9.2 | |||||||
| Corresponding_transcript | F40G9.2.1 | ||||||||
| Other_sequence | PPC05782_1 | ||||||||
| Associated_feature | WBsf991003 | ||||||||
| WBsf991004 | |||||||||
| WBsf991005 | |||||||||
| WBsf224347 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032053 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000666 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046909 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1628 | ||||||||
| Expr6018 | |||||||||
| Expr1017197 | |||||||||
| Expr1150779 | |||||||||
| Expr2010473 | |||||||||
| Expr2028713 | |||||||||
| Drives_construct | WBCnstr00003704 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction | WBInteraction000035585 | ||||||||
| WBInteraction000110277 | |||||||||
| WBInteraction000134575 | |||||||||
| WBInteraction000156946 | |||||||||
| WBInteraction000168712 | |||||||||
| WBInteraction000180145 | |||||||||
| WBInteraction000182444 | |||||||||
| WBInteraction000205731 | |||||||||
| WBInteraction000250178 | |||||||||
| WBInteraction000255602 | |||||||||
| WBInteraction000260518 | |||||||||
| WBInteraction000296252 | |||||||||
| WBInteraction000303287 | |||||||||
| WBInteraction000313895 | |||||||||
| WBInteraction000328669 | |||||||||
| WBInteraction000331518 | |||||||||
| WBInteraction000347433 | |||||||||
| WBInteraction000354760 | |||||||||
| WBInteraction000365979 | |||||||||
| WBInteraction000387587 | |||||||||
| WBInteraction000388314 | |||||||||
| WBInteraction000418880 | |||||||||
| WBInteraction000437741 | |||||||||
| WBInteraction000447855 | |||||||||
| WBInteraction000461648 | |||||||||
| WBInteraction000466414 | |||||||||
| WBInteraction000467186 | |||||||||
| WBInteraction000468992 | |||||||||
| WBInteraction000471527 | |||||||||
| WBInteraction000561668 | |||||||||
| WBInteraction000581868 | |||||||||
| Map_info | Map | III | Position | -26.92 | |||||
| Positive | Positive_clone | F40G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
