WormBase Tree Display for Gene: WBGene00018118

WBGene00018118 SMap: S_parent: Sequence: F36H12
  Identity: Version: 2
    Name: CGC_name: slfl-4 Person_evidence: WBPerson1159
          Laboratory_evidence: RFK
      Sequence_name: F36H12.2
      Molecular_name: F36H12.2a
        F36H12.2a.1
        CE34854
        F36H12.2b
        CE49225
        F36H12.2b.1
      Other_name: F36H12.2
        CELE_F36H12.2 Accession_evidence: NDB BX284604
      Public_name: slfl-4
    DB_info: Database: AceView gene 4G41
        WormQTL gene WBGene00018118
        WormFlux gene WBGene00018118
        NDB locus_tag CELE_F36H12.2
        NCBI gene 185394
        RefSeq protein NM_001380220.2
            NM_001306813.4
        SwissProt UniProtAcc O76720
        UniProt_GCRP UniProtAcc O76720
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Sep 2022 22:37:18 WBPerson21950 Name_change: CGC_name: slfl-4
                Other_name: F36H12.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: slfl
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation: 00038665
      00038666
    Ortholog (18)
    Paralog: WBGene00016460 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Enriched in anal sphincter muscle; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including eat-2; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including manganese chloride; bisphenol S; and allantoin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36H12.2a
      F36H12.2b
    Corresponding_CDS_history: F36H12.2:wp104
    Corresponding_transcript: F36H12.2a.1
      F36H12.2b.1
    Other_sequence: CRC00533_1
      CR11021
      CR01903
      PT02481
    Associated_feature: WBsf228282
  Experimental_info: RNAi_result: WBRNAi00046527 Inferred_automatically: RNAi_primary
      WBRNAi00014448 Inferred_automatically: RNAi_primary
      WBRNAi00042009 Inferred_automatically: RNAi_primary
      WBRNAi00008199 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1037806
      Expr1150414
      Expr2003404
      Expr2021617
    Drives_construct: WBCnstr00026767
    Construct_product: WBCnstr00026767
    Microarray_results (17)
    Expression_cluster (101)
    SAGE_tag: SAGE:aaattcccaatattctc Strand: Sense
        Unambiguously_mapped
      SAGE:aaattcccaa Strand: Sense
        Unambiguously_mapped
      SAGE:attttctctgagaatct Strand: Antisense
      SAGE:aatcctgttg Strand: Antisense
      SAGE:cttccccgtc Strand: Antisense
    Interaction: WBInteraction000121668
      WBInteraction000216107
      WBInteraction000230025
      WBInteraction000242950
      WBInteraction000246236
      WBInteraction000250602
      WBInteraction000257729
      WBInteraction000261064
      WBInteraction000266761
      WBInteraction000273962
      WBInteraction000277135
      WBInteraction000280009
      WBInteraction000288625
      WBInteraction000290862
      WBInteraction000292950
      WBInteraction000294674
      WBInteraction000298449
      WBInteraction000301602
      WBInteraction000303766
      WBInteraction000303783
      WBInteraction000304280
      WBInteraction000317126
      WBInteraction000317216
      WBInteraction000321953
      WBInteraction000329314
      WBInteraction000331485
      WBInteraction000331561
      WBInteraction000332741
      WBInteraction000337410
      WBInteraction000339057
      WBInteraction000342735
      WBInteraction000342918
      WBInteraction000344044
      WBInteraction000347117
      WBInteraction000347960
      WBInteraction000349075
      WBInteraction000356845
      WBInteraction000357176
      WBInteraction000365257
      WBInteraction000370145
      WBInteraction000371250
      WBInteraction000376033
      WBInteraction000380548
      WBInteraction000383187
      WBInteraction000385287
      WBInteraction000390400
      WBInteraction000392098
      WBInteraction000397335
      WBInteraction000398541
      WBInteraction000406809
      WBInteraction000412112
      WBInteraction000413106
      WBInteraction000414452
      WBInteraction000414762
      WBInteraction000415354
      WBInteraction000416819
      WBInteraction000419620
      WBInteraction000421320
      WBInteraction000423387
      WBInteraction000427670
      WBInteraction000436695
      WBInteraction000438009
      WBInteraction000439178
      WBInteraction000443603
      WBInteraction000448078
      WBInteraction000448398
      WBInteraction000450534
      WBInteraction000453390
      WBInteraction000458068
      WBInteraction000460016
  Map_info: Positive: Positive_clone: F36H12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 1.58805
  Method: Gene