WormBase Tree Display for Gene: WBGene00017962
expand all nodes | collapse all nodes | view schema
WBGene00017962 | SMap | S_parent | Sequence | F31F4 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | fbxa | |||||
Allele (137) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (44) | ||||||
Paralog (225) | ||||||
Structured_description | Automated_description | Enriched in several structures, including Z1.p; body wall muscle cell from C lineage; intestine; male distal tip cell; and somatic gonad precursor based on tiling array; RNA-seq; proteomic; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-four chemicals including Tunicamycin; sodium arsenite; and indole based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F31F4.15a | ||||
F31F4.15b | ||||||
Corresponding_CDS_history | F31F4.15:wp248 | |||||
Corresponding_transcript | F31F4.15a.1 | |||||
F31F4.15b.1 | ||||||
Other_sequence | CBC06146_1 | |||||
Associated_feature | WBsf233285 | |||||
Experimental_info | RNAi_result | WBRNAi00031633 | Inferred_automatically | RNAi_primary | ||
WBRNAi00046043 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00014166 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00114472 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1018864 | |||||
Expr1149936 | ||||||
Expr2011572 | ||||||
Expr2029810 | ||||||
Drives_construct | WBCnstr00026884 | |||||
Construct_product | WBCnstr00026884 | |||||
Microarray_results (13) | ||||||
Expression_cluster (256) | ||||||
Interaction | WBInteraction000186766 | |||||
WBInteraction000207812 | ||||||
WBInteraction000304943 | ||||||
WBInteraction000310080 | ||||||
WBInteraction000317906 | ||||||
WBInteraction000382485 | ||||||
WBInteraction000386798 | ||||||
WBInteraction000404205 | ||||||
WBInteraction000425397 | ||||||
WBInteraction000436508 | ||||||
WBInteraction000451735 | ||||||
WBInteraction000457481 | ||||||
WBInteraction000519392 | ||||||
WBInteraction000578675 | ||||||
Map_info | Map | V | Position | -19.9665 | ||
Positive | Positive_clone | F31F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00065331 | |||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |