WormBase Tree Display for Gene: WBGene00016648
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| WBGene00016648 | SMap | S_parent | Sequence | C44C8 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | fbxc | |||||
| Allele (17) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (21) | ||||||
| Paralog (36) | ||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | ||
| Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||
| Automated_description | Enriched in intestine and neurons based on RNA-seq and microarray studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by twelve chemicals including D-glucopyranose; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | C44C8.3 | ||||
| Corresponding_CDS_history | C44C8.3:wp172 | |||||
| Corresponding_transcript | C44C8.3.1 | |||||
| Associated_feature | WBsf227892 | |||||
| Experimental_info | RNAi_result | WBRNAi00011942 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00042469 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00016035 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00011943 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00042472 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00042474 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00042473 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00011945 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00011944 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1146461 | |||||
| Drives_construct | WBCnstr00027913 | |||||
| Construct_product | WBCnstr00027913 | |||||
| Microarray_results | 180035_s_at | |||||
| GPL8673_F58H7_8P00891 | ||||||
| Expression_cluster (61) | ||||||
| Interaction | WBInteraction000105014 | |||||
| WBInteraction000142850 | ||||||
| WBInteraction000168112 | ||||||
| WBInteraction000242181 | ||||||
| WBInteraction000275897 | ||||||
| WBInteraction000276398 | ||||||
| WBInteraction000310481 | ||||||
| WBInteraction000314377 | ||||||
| WBInteraction000326278 | ||||||
| WBInteraction000342837 | ||||||
| WBInteraction000348027 | ||||||
| WBInteraction000370809 | ||||||
| WBInteraction000371730 | ||||||
| WBInteraction000372390 | ||||||
| WBInteraction000373867 | ||||||
| WBInteraction000376959 | ||||||
| WBInteraction000380146 | ||||||
| WBInteraction000381623 | ||||||
| WBInteraction000384902 | ||||||
| WBInteraction000389270 | ||||||
| WBInteraction000396155 | ||||||
| WBInteraction000397901 | ||||||
| WBInteraction000400905 | ||||||
| WBInteraction000405472 | ||||||
| WBInteraction000414960 | ||||||
| WBInteraction000416116 | ||||||
| WBInteraction000418015 | ||||||
| WBInteraction000418164 | ||||||
| WBInteraction000420397 | ||||||
| WBInteraction000425842 | ||||||
| WBInteraction000429280 | ||||||
| WBInteraction000429354 | ||||||
| WBInteraction000433847 | ||||||
| WBInteraction000443251 | ||||||
| WBInteraction000448128 | ||||||
| WBInteraction000452376 | ||||||
| WBInteraction000453421 | ||||||
| WBInteraction000456613 | ||||||
| WBInteraction000457914 | ||||||
| WBInteraction000459364 | ||||||
| WBInteraction000459402 | ||||||
| WBInteraction000462100 | ||||||
| Map_info | Map | IV | Position | -23.1573 | ||
| Positive | Positive_clone | C44C8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00012854 | |||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
